YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24079969

General Information:
Name(s) found: gi|24079969 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|24079969|gb|AAN46090.1| transcription factor Dp-1 [Homo sapiens] [NCBI NR]
  • transcription factor Dp-1 [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=9606 44KDA PROTEIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
    • Organism: Homo sapiens
    Length: 406 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGLIEANGEL KVFIDQNLSP GKGVVSLVAV HPSTVNPLGK QLLPKTFGQS NVNIAQQVVI  60
   61 GTPQRPAASN TLVVGSPHTP STHFASQNQP SDSSPWSAGK RNRKGEKNGK GLRHFSMKVC 120
  121 EKVQRKGTTS YNEVADELVA EFSAADNHIL PNESAYDQKN IRRRVYDALN VLMAMNIISK 180
  181 EKKEIKWIGL PTNSAQECQN LEVERQRRLE RIKQKQSQLQ ELILQQIAFK NLVQRNRHAE 240
  241 QQASRPPPPN SVIHLPFIIV NTSKKTVIDC SISNDKFEYL FNFDNTFEIH DDIEVLKRMG 300
  301 MACGLESGSC SAEDLKMARS LVPKALEPYV TEMAQGTVGG VFITTAGSTS NGTRFSASDL 360
  361 TNGADGMLAT SSNGSQYSGS RVETPVSYVG EDDEEDDDFN ENDEDD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] deduced N/A No confident structure predictions are available.
    2 View Details [106..190] PSI-BLAST 31.69897 Cell cycle transcription factor DP-2
    3 View Details [191..406] PSI-BLAST 70.154902 Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  5.55329976718261 bayes_pls_golite062009
  • DNA binding
    		•  5.08959163553491 bayes_pls_golite062009
  • nucleic acid binding
    		•  4.99681957904233 bayes_pls_golite062009
  • transcription factor activity
    		•  4.33152142980289 bayes_pls_golite062009
  • transcription activator activity
    		•  3.70589483230587 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  3.58179858678904 bayes_pls_golite062009
  • binding
    		•  3.52874320222492 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  2.60738445921725 bayes_pls_golite062009
  • transcription repressor activity
    		•  2.22485867684613 bayes_pls_golite062009
  • protein binding
    		•  1.80415286835431 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  1.2723726467408 bayes_pls_golite062009
  • transcription factor binding
    		•  0.85714789329232 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  0.66743181561551 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity, enhancer binding
    		•  0.23177057841536 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle