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Protein Overview: DR102_ARATH

General Information:
Name(s) found: DR102_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • DNA-damage-repair/toleration protein DRT102 OS=Arabidopsis thaliana GN=DRT102 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    Biological Process: response to cold [IEP]
    photoreactive repair [IGI]
    response to UV [IGI]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGAVSAVDQ PLKIITGADD FGASLKDAMV THLRSLGIDV EDTGVSSYYS AGSEVGRRVS  60
   61 ASSSSEVRGL VCCGTGVGVA MFANKFPGVY AATCLSVEDA VNARSISNCN VLAFSGIKTS 120
  121 PETALEIFDA WIKTPFKSPC PASGSEPWSS VISSFLDNSL SEMSQIGKST AGDSTTKKID 180
  181 ETTASCVICC LAKNREFTPV DIMPGGSMKI VRETPTSAIV RFKAGSVEPA HHHTFGHDLV 240
  241 VIKGKKSVWN LSKKERADLV DGDYLFTPAG DVHRVKYHED TEFFITWDGH WDIFLDEDLE 300
  301 TAKKAIEEEA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] PSI-BLAST 47.09691 Alternate ribose 5-phosphate isomerase B, RpiB
    2 View Details [170..310] PSI-BLAST 7.69897 Crystal structure of hypothetical protein (tm1010) from THERMOTOGA MARITIMA at 1.90 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribose-5-phosphate isomerase activity
    		•  5.69997185547565 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  4.04314332668154 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  3.57097659815257 bayes_pls_golite062009
  • isomerase activity
    		•  2.42530141345385 bayes_pls_golite062009
  • catalytic activity
    		•  2.21687627610124 bayes_pls_golite062009
  • allose 6-phosphate isomerase activity
    		•  2.20293230847792 bayes_pls_golite062009
    2
    Term Confidence Notes
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  0.92873878943528 bayes_pls_golite062009
  • catalytic activity
    		•  0.77242843392921 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  0.46967672268489 bayes_pls_golite062009
  • 3-hydroxyanthranilate 3,4-dioxygenase activity
    		•  0.13502301682218 bayes_pls_golite062009
  • isomerase activity
    		•  0.02840080734269 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle