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Protein Overview: gi|7494228

General Information:
Name(s) found: gi|7494228 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • pir||T18458 26S proteasome regulatory complex chain p31 [similarity] - malaria parasite (Plasmodium falciparum) [NCBI NR]
    • Organism: Plasmodium falciparum
    Length: 304 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: ubiquitin-dependent protein catabolic process [ISSLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNVLEECIK LYKDLICCYN NISEKELIEG TNDDLDNLLN LNEDISISTA CDINKCKEIL  60
   61 GKLKLLIIHL SSVNPLICIG QKDIRELLIV RGILEKGVII SIRNKDIKSF NIYIAQLFIY 120
  121 YFDYKDILPK SKKQNAIVGL YLLYLLASNS IGDFHMTLEI LPLEDHNDIY IKYVLNVEQN 180
  181 IMDGFFHHVL TKKENIPLYL YESFMDKLYT TIRFKLIDCI FASTNSIHLL YACELLKLSN 240
  241 QQNLNDFIIQ YNEAKNNQGE YNAVCEIKDN HIVCKNQTIA VQQLPSLEII NNSIGYATEL 300
  301 ERIV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] MSA 2.115996 View MSA. No confident structure predictions are available.
    2 View Details [74..304] FFAS03 1.54 Crystal Structure of Human eIF3k

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.76236644111948 bayes_pls_golite062009
  • hydrolase activity
    		•  2.62777210765927 bayes_pls_golite062009
  • protein binding
    		•  1.5114863464349 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.08079130332447 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.06350696248374 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.700922242779288 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.37240198519167 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.224432853777564 bayes_pls_golite062009
  • DNA binding
    		•  0.180353635969032 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.147335771550418 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
    		•  0.142921675412538 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  0.124542865343065 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle