| Protein: | gi|7494228 |
| Organism: | Plasmodium falciparum |
| Length: | 304 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7494228.
| Description | E-value | Query Range |
Subject Range |
|
|
265.0 | [0..5] | [304..2] |
|
|
264.0 | [0..1] | [304..1] |
|
|
263.0 | [0..1] | [304..1] |
|
|
261.0 | [0..41] | [304..98] |
|
|
261.0 | [0..28] | [267..532] |
|
|
261.0 | [0..28] | [267..550] |
|
|
261.0 | [0..28] | [267..501] |
|
|
256.0 | [0..41] | [304..96] |
|
Region A: Residues: [1-73] |
1 11 21 31 41 51
| | | | | |
1 MSNVLEECIK LYKDLICCYN NISEKELIEG TNDDLDNLLN LNEDISISTA CDINKCKEIL 60
61 GKLKLLIIHL SSV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [74-304] |
1 11 21 31 41 51
| | | | | |
1 NPLICIGQKD IRELLIVRGI LEKGVIISIR NKDIKSFNIY IAQLFIYYFD YKDILPKSKK 60
61 QNAIVGLYLL YLLASNSIGD FHMTLEILPL EDHNDIYIKY VLNVEQNIMD GFFHHVLTKK 120
121 ENIPLYLYES FMDKLYTTIR FKLIDCIFAS TNSIHLLYAC ELLKLSNQQN LNDFIIQYNE 180
181 AKNNQGEYNA VCEIKDNHIV CKNQTIAVQQ LPSLEIINNS IGYATELERI V
|
| Detection Method: | |
| Confidence: | 1.54 |
| Match: | 1rz4A |
| Description: | Crystal Structure of Human eIF3k |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.76236644111948 | bayes_pls_golite062009 |
| hydrolase activity | 2.62777210765927 | bayes_pls_golite062009 |
| protein binding | 1.5114863464349 | bayes_pls_golite062009 |
| nucleic acid binding | 1.08079130332447 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.06350696248374 | bayes_pls_golite062009 |
| transcription repressor activity | 0.700922242779288 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.37240198519167 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.224432853777564 | bayes_pls_golite062009 |
| DNA binding | 0.180353635969032 | bayes_pls_golite062009 |
| transcription regulator activity | 0.147335771550418 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.142921675412538 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.124542865343065 | bayes_pls_golite062009 |
