Protein Overview: gi|22655228, gi|...

General Information:
Name(s) found:	gi\|51971441 [NCBI NR] gi\|30693135 [NCBI NR] gi\|30387523 [NCBI NR] gi\|22655228 [NCBI NR]
Description(s) found: Found 14 descriptions. SHOW ALL	gi\|51971441\|dbj\|BAD44385.1\| hypothetical protein [Arabidopsis thaliana] [NCBI NR] gi\|30693135\|ref\|NP_190477.2\| ribosomal protein S9 family protein [Arabidopsis thaliana] [NCBI NR] gi\|30387523\|gb\|AAP31927.1\| At3g49080 [Arabidopsis thaliana] [NCBI NR] gi\|22655228\|gb\|AAM98204.1\| unknown protein [Arabidopsis thaliana] [NCBI NR]
Organism:	Arabidopsis thaliana
Length:	430 amino acids
Gene Ontology:
Cellular Component:	cytosolic small ribosomal subunit [ISS] ribosome [IEA] intracellular [IEA]
Biological Process:	translation [IEA][ISS]
Molecular Function:	structural constituent of ribosome [IEA][ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRLFLRHS NLRFVTLVSS KSNSQIFSSF IRPLSTNSSG GGGNGDGNGR NRNDVPWSFT  60
   61 GVNDDKSGPF SSDDSFGSSG VAGSGLPGGE GKWPEEPKRW NIKEEEEKVV FDTGGEVGQG 120
  121 IETSRERRGN EWEETKRWDM KEGEEKVVFG GGGDEVDGFG IRGEVKSNEW DVSKPWNLKE 180
  181 EEEGVVFDTG GEVPFSFENS LEMAEEERVK KELIEKEEKE LLEVIKGPDR AFGDLIAKSG 240
  241 ITDEMLDSLI ALKDFQGVEG LPPLTEIENL RREKSSKKSS RAEIELQMQE DIAKARVRQV 300
  301 DETGRAYGTG RRKCSIARVW IQPGEGKFQV NEKEFDVYFP MLDHRAALLR PLAETKTLGR 360
  361 WDIKCTVKGG GTTGQVGAIQ LGISRALQNW EPDMRTSLRA AGFLTRDSRV VERKKPGKAK 420
  421 ARKSFQWVKR

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

No functions predicted.

Term	Confidence	Notes
structural constituent of ribosome	7.32829196949019	bayes_pls_golite062009
structural molecule activity	6.75880680396215	bayes_pls_golite062009
3'-5'-exoribonuclease activity	1.56111033008721	bayes_pls_golite062009
RNA binding	1.40868766468494	bayes_pls_golite062009
exoribonuclease activity, producing 5'-phosphomonoesters	1.35935222635763	bayes_pls_golite062009
exoribonuclease activity	1.31205157616894	bayes_pls_golite062009
3'-5' exonuclease activity	1.10842504252923	bayes_pls_golite062009
catalytic activity	0.878454819018611	bayes_pls_golite062009
nucleic acid binding	0.555181608481691	bayes_pls_golite062009
binding	0.478154009944658	bayes_pls_golite062009
transcription regulator activity	0.368412900600617	bayes_pls_golite062009
ribonuclease activity	0.19921800066954	bayes_pls_golite062009
DNA binding	0.0880977286684361	bayes_pls_golite062009
mRNA binding	0.0491645692672305	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	6.9430052008157E-5	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..298]	deduced	N/A	No confident structure predictions are available.
2	View Details	[299..430]	PSI-BLAST	48.30103	No description for 1vs5I was found.

Protein Overview: gi|22655228, gi|...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: