| Protein: | gi|22655228, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 430 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22655228, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
519.0 | [0..1] | [430..1] |
|
Region A: Residues: [1-298] |
1 11 21 31 41 51
| | | | | |
1 MLSRLFLRHS NLRFVTLVSS KSNSQIFSSF IRPLSTNSSG GGGNGDGNGR NRNDVPWSFT 60
61 GVNDDKSGPF SSDDSFGSSG VAGSGLPGGE GKWPEEPKRW NIKEEEEKVV FDTGGEVGQG 120
121 IETSRERRGN EWEETKRWDM KEGEEKVVFG GGGDEVDGFG IRGEVKSNEW DVSKPWNLKE 180
181 EEEGVVFDTG GEVPFSFENS LEMAEEERVK KELIEKEEKE LLEVIKGPDR AFGDLIAKSG 240
241 ITDEMLDSLI ALKDFQGVEG LPPLTEIENL RREKSSKKSS RAEIELQMQE DIAKARVR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [299-430] |
1 11 21 31 41 51
| | | | | |
1 QVDETGRAYG TGRRKCSIAR VWIQPGEGKF QVNEKEFDVY FPMLDHRAAL LRPLAETKTL 60
61 GRWDIKCTVK GGGTTGQVGA IQLGISRALQ NWEPDMRTSL RAAGFLTRDS RVVERKKPGK 120
121 AKARKSFQWV KR
|
| Detection Method: | |
| Confidence: | 48.30103 |
| Match: | 1vs5I |
| Description: | No description for 1vs5I was found. |
| Term | Confidence | Notes |
| structural constituent of ribosome | 7.32829196949019 | bayes_pls_golite062009 |
| structural molecule activity | 6.75880680396215 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 1.56111033008721 | bayes_pls_golite062009 |
| RNA binding | 1.40868766468494 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 1.35935222635763 | bayes_pls_golite062009 |
| exoribonuclease activity | 1.31205157616894 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 1.10842504252923 | bayes_pls_golite062009 |
| catalytic activity | 0.878454819018611 | bayes_pls_golite062009 |
| nucleic acid binding | 0.555181608481691 | bayes_pls_golite062009 |
| binding | 0.478154009944658 | bayes_pls_golite062009 |
| transcription regulator activity | 0.368412900600617 | bayes_pls_golite062009 |
| ribonuclease activity | 0.19921800066954 | bayes_pls_golite062009 |
| DNA binding | 0.0880977286684361 | bayes_pls_golite062009 |
| mRNA binding | 0.0491645692672305 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 6.9430052008157E-5 | bayes_pls_golite062009 |
