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Protein Overview: APA2_ARATH

General Information:
Name(s) found: APA2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|79320483|ref|NP_001031219.1| aspartyl protease family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|23297031|gb|AAN13225.1| putative aspartic protease [Arabidopsis thaliana] [NCBI NR]
  • gi|22330379|ref|NP_176419.2| aspartyl protease family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|222424000|dbj|BAH19961.1| AT1G62290 [Arabidopsis thaliana] [NCBI NR]
  • gi|17979428|gb|AAL49856.1| putative aspartic protease [Arabidopsis thaliana] [NCBI NR]
  • Aspartic proteinase A2 OS=Arabidopsis thaliana GN=APA2 PE=2 SV=1 [Swiss-Prot]
  • putative aspartic protease [Arabidopsis thaliana]gi|17979428|gb|AAL49856.1| putative aspartic protease [Arabidopsis thaliana]gi|22330379|ref|NP_176419.2| aspartyl protease family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Aspartyl protease family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | aspartyl protease family protein | chr1:23013772-23016346 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • aspartic-type endopeptidase/ pepsin A [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative aspartic protease [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Saposin-like aspartyl protease family protein | chr1:23010107-23012681 REVERSE LENGTH=513 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 513 amino acids

    Gene Ontology:
    Cellular Component: vacuole [IDA]
    Biological Process: proteolysis [IEA][ISS]
    lipid metabolic process [IEA]
    Molecular Function: aspartic-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVYSRAVAF SVFVSFLLFF TAYSKRNDGT FRVGLKKLKL DPNNRLATRF GSKQEEALRS  60
   61 SLRSYNNNLG GDSGDADIVP LKNYLDAQYY GEIAIGTPPQ KFTVIFDTGS SNLWVPSGKC 120
  121 FFSLSCYFHA KYKSSRSSTY KKSGKRAAIH YGSGSISGFF SYDAVTVGDL VVKDQEFIET 180
  181 TSEPGLTFLV AKFDGLLGLG FQEIAVGNAT PVWYNMLKQG LIKRPVFSFW LNRDPKSEEG 240
  241 GEIVFGGVDP KHFRGEHTFV PVTQRGYWQF DMGEVLIAGE STGYCGSGCS AIADSGTSLL 300
  301 AGPTAVVAMI NKAIGASGVV SQQCKTVVDQ YGQTILDLLL AETQPKKICS QIGLCAYDGT 360
  361 HGVSMGIESV VDKENTRSSS GLRDAGCPAC EMAVVWIQSQ LRQNMTQERI VNYINEICER 420
  421 MPSPNGESAV DCSQLSKMPT VSFTIGGKVF DLAPEEYVLK IGEGPVAQCI SGFTALDIPP 480
  481 PRGPLWILGD VFMGKYHTVF DFGNEQVGFA EAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..513] PSI-BLAST 114.0 (Pro)phytepsin; Plant acid proteinase, phytepsin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.01508543827677 bayes_pls_golite062009
  • hydrolase activity
    		•  0.77554493777157 bayes_pls_golite062009
  • peptidase activity
    		•  0.68518523369811 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.43925265235199 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.43264884039584 bayes_pls_golite062009
  • aspartic-type endopeptidase activity
    		•  0.30585066730542 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  0.30585066730542 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle