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Protein Overview: CLPR4_ARATH

General Information:
Name(s) found: CLPR4_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 305 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    chloroplast envelope [IDA]
    plastid stroma [IDA]
    Biological Process: proteolysis [IEA]
    Molecular Function: serine-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVAAATATS FTTLRARTSA IIPSSTRNLR SKPRFSSSSS LRASLSNGFL SPYTGGSISS  60
   61 DLCGAKLRAE SLNPLNFSSS KPKRGVVTMV IPFSKGSAHE QPPPDLASYL FKNRIVYLGM 120
  121 SLVPSVTELI LAEFLYLQYE DEEKPIYLYI NSTGTTKNGE KLGYDTEAFA IYDVMGYVKP 180
  181 PIFTLCVGNA WGEAALLLTA GAKGNRSALP SSTIMIKQPI ARFQGQATDV EIARKEIKHI 240
  241 KTEMVKLYSK HIGKSPEQIE ADMKRPKYFS PTEAVEYGII DKVVYNERGS QDRGVVSDLK 300
  301 KAQLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..85] deduced N/A No confident structure predictions are available.
    2 View Details [86..305] PSI-BLAST 73.39794 Clp protease, ClpP subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.46154163027498 bayes_pls_golite062009
  • enoyl-CoA hydratase activity
    		•  1.27969156772229 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  0.939626895227199 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  0.764444938444292 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  0.621229080200493 bayes_pls_golite062009
  • binding
    		•  0.578223105269736 bayes_pls_golite062009
  • hydrolase activity
    		•  0.534319520590169 bayes_pls_golite062009
  • ligase activity
    		•  0.32092496884003 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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