YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CLPR4_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVAAATATS FTTLRARTSA IIPSSTRNLR SKPRFSSSSS LRASLSNGFL SPYTGGSISS  60
   61 DLCGAKLRAE SLNPLNFSSS KPKRGVVTMV IPFSKGSAHE QPPPDLASYL FKNRIVYLGM 120
  121 SLVPSVTELI LAEFLYLQYE DEEKPIYLYI NSTGTTKNGE KLGYDTEAFA IYDVMGYVKP 180
  181 PIFTLCVGNA WGEAALLLTA GAKGNRSALP SSTIMIKQPI ARFQGQATDV EIARKEIKHI 240
  241 KTEMVKLYSK HIGKSPEQIE ADMKRPKYFS PTEAVEYGII DKVVYNERGS QDRGVVSDLK 300
  301 KAQLI

Type	Start	End	Confidence
Signal Peptide	1	16	0.53
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	305	0.96