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Protein Overview: gi|79598781, gi|...

General Information:
Name(s) found: gi|79598781 [NCBI NR]
gi|23198186 [NCBI NR]
gi|22326796 [NCBI NR]
gi|20466476 [NCBI NR]
Description(s) found:
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  • gi|79598781|ref|NP_851037.2| glycosyl hydrolase family 38 protein [Arabidopsis thaliana] [NCBI NR]
  • gi|23198186|gb|AAN15620.1| alpha-mannosidase [Arabidopsis thaliana] [NCBI NR]
  • gi|22326796|ref|NP_196902.2| glycosyl hydrolase family 38 protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20466476|gb|AAM20555.1| alpha-mannosidase [Arabidopsis thaliana] [NCBI NR]
  • alpha-mannosidase [Arabidopsis thaliana]gi|20466476|gb|AAM20555.1| alpha-mannosidase [Arabidopsis thaliana]gi|22326796|ref|NP_196902.2| glycosyl hydrolase family 38 protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | glycosyl hydrolase family 38 protein | chr5:4508628-4514336 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • alpha-mannosidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Glycosyl hydrolase family 38 protein | chr5:4508626-4514334 FORWARD LENGTH=1024 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Alpha-mannosidase OS=Arabidopsis thaliana GN=At5g13980 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1024 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    apoplast [IDA]
    plant-type cell wall [IDA]
    vacuole [IDA]
    plasma membrane [IDA]
    Biological Process: carbohydrate metabolic process [IEA]
    mannose metabolic process [IEA]
    Molecular Function: alpha-mannosidase activity [IEA][ISS]
    zinc ion binding [IEA]
    catalytic activity [IEA]
    mannosidase activity [IEA]
    carbohydrate binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLAKFLCWI VLLLGISLVE SRYMVYNTSH TIVPGKLNVH VVPHSHDDVG WLKTVDQYYV  60
   61 GSNNSIQVAC VQNVLDSIVP ALLADKNRKF IYVEQAFFQR WWNEQSEEIK RIVKELIHSG 120
  121 QLELINGGMC MHDEAAPHYI DMIDQTTLGH RFIIREFNVT PRIGWQIDPF GHSAVQAYLL 180
  181 GAEVGFDSVF FGRIDYQDRE KRYKEKTLEV IWRGSKSLGS SSQIFAGAFP TNYEPPPGGF 240
  241 YYEITDDSPV VQDDPDLFDY NVQERVNAFV AAALDQANIT RINHIMFTMG TDFRYQYAHT 300
  301 WYRQMDKLIH YVNLDGRVNA FYSTPSIYTD AKHAANEAWP LKTEDYFPYA DRINAYWTGY 360
  361 FTSRPALKRY VRVMSAYYLA ARQLEFFKGR SQKGPNTDSL ADALAIAQHH DAVSGTSKQH 420
  421 VANDYAKRLA IGYVEAESVV ATSLAHLTKV DPTLNPTFQQ CLLLNISYCP SSEVNLSDGK 480
  481 SLIVLAYNPL GWKRVDIVRL PVVGGDVSVH DSEGHEVESQ LVPFTDEYVA LRKYHVEAYL 540
  541 GQSPTQVPKY WLVFSVTVPP LGFTTYTIST AKKTDGYSSK SYVSNILKGE QSIINIGHGH 600
  601 LKLSFSTDQG TAINYVNGRT SMTEPVKQTF SYYSAYNGSN DKEPLIPQNS GAYVFRPNGT 660
  661 FPINPEGQVP LTVIHGPLVD EVHQQINPWI SQITRVYKGK EHVEVEFIVG NIPIDDGIGK 720
  721 EVVTQISSSL KSNKTFYTDS SGRDYIKRIR DYRSDWKLDV NQPIAGNYYP INHGIYLQDS 780
  781 KKEFSVMVDR AFGGSSIVDG QVELMLHRRL LLDDSRGVAE NLNETVCVQD KCTGLTIQGK 840
  841 YYYRIDPYGE GAKWRRTFGQ EIYSPLLLAF AQQDDGKPMS FGAASFSGID PSYSLPDNVA 900
  901 LLTLQELDDG NVLLRLAHLY EVEEDKELSG VASVELKKLF PGKKIGKLTE MSLSANQERS 960
  961 TMEKKRLVWK VEGEGSYGEE KKAKRGREID PRKLEMELYP MEIRTVLIHL ELPSSHSRIN1020
 1021 RFDA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..976] PSI-BLAST 1000.0 Golgi alpha-mannosidase II in complex with kifunensine
    2 View Details [977..1024] PSI-BLAST 21.69897 The structure of the bovine lysosomal a-mannosidase suggests a novel mechanism for low pH activation


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle