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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|79598781, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLAKFLCWI VLLLGISLVE SRYMVYNTSH TIVPGKLNVH VVPHSHDDVG WLKTVDQYYV  60
   61 GSNNSIQVAC VQNVLDSIVP ALLADKNRKF IYVEQAFFQR WWNEQSEEIK RIVKELIHSG 120
  121 QLELINGGMC MHDEAAPHYI DMIDQTTLGH RFIIREFNVT PRIGWQIDPF GHSAVQAYLL 180
  181 GAEVGFDSVF FGRIDYQDRE KRYKEKTLEV IWRGSKSLGS SSQIFAGAFP TNYEPPPGGF 240
  241 YYEITDDSPV VQDDPDLFDY NVQERVNAFV AAALDQANIT RINHIMFTMG TDFRYQYAHT 300
  301 WYRQMDKLIH YVNLDGRVNA FYSTPSIYTD AKHAANEAWP LKTEDYFPYA DRINAYWTGY 360
  361 FTSRPALKRY VRVMSAYYLA ARQLEFFKGR SQKGPNTDSL ADALAIAQHH DAVSGTSKQH 420
  421 VANDYAKRLA IGYVEAESVV ATSLAHLTKV DPTLNPTFQQ CLLLNISYCP SSEVNLSDGK 480
  481 SLIVLAYNPL GWKRVDIVRL PVVGGDVSVH DSEGHEVESQ LVPFTDEYVA LRKYHVEAYL 540
  541 GQSPTQVPKY WLVFSVTVPP LGFTTYTIST AKKTDGYSSK SYVSNILKGE QSIINIGHGH 600
  601 LKLSFSTDQG TAINYVNGRT SMTEPVKQTF SYYSAYNGSN DKEPLIPQNS GAYVFRPNGT 660
  661 FPINPEGQVP LTVIHGPLVD EVHQQINPWI SQITRVYKGK EHVEVEFIVG NIPIDDGIGK 720
  721 EVVTQISSSL KSNKTFYTDS SGRDYIKRIR DYRSDWKLDV NQPIAGNYYP INHGIYLQDS 780
  781 KKEFSVMVDR AFGGSSIVDG QVELMLHRRL LLDDSRGVAE NLNETVCVQD KCTGLTIQGK 840
  841 YYYRIDPYGE GAKWRRTFGQ EIYSPLLLAF AQQDDGKPMS FGAASFSGID PSYSLPDNVA 900
  901 LLTLQELDDG NVLLRLAHLY EVEEDKELSG VASVELKKLF PGKKIGKLTE MSLSANQERS 960
  961 TMEKKRLVWK VEGEGSYGEE KKAKRGREID PRKLEMELYP MEIRTVLIHL ELPSSHSRIN1020
 1021 RFDA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle