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Protein Overview: SCP29_ARATH

General Information:
Name(s) found: SCP29_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75332010|sp|Q949Q7.1|SCP29_ARATH RecName: Full=Serine carboxypeptidase-like 29; Flags: Precursor [NCBI NR]
  • gi|22136958|gb|AAM91708.1| putative serine carboxypeptidase II [Arabidopsis thaliana] [NCBI NR]
  • gi|18417667|ref|NP_567854.1| scpl29 (serine carboxypeptidase-like 29); serine-type carboxypeptidase [Arabidopsis thaliana] [NCBI NR]
  • gi|15293049|gb|AAK93635.1| putative serine carboxypeptidase II [Arabidopsis thaliana] [NCBI NR]
  • Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1 [Swiss-Prot]
  • putative serine carboxypeptidase II [Arabidopsis thaliana]gi|15293049|gb|AAK93635.1| putative serine carboxypeptidase II [Arabidopsis thaliana]gi|18417667|ref|NP_567854.1| serine carboxypeptidase S10 family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Serine carboxypeptidase S10 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SCPL29 | SCPL29 (serine carboxypeptidase-like 29); serine carboxypeptidase | chr4:15003480-15006023 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative serine carboxypeptidase II [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SCPL29; catalytic/ serine carboxypeptidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: scpl29 | serine carboxypeptidase-like 29 | chr4:15003474-15006017 FORWARD LENGTH=479 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 479 amino acids

    Gene Ontology:
    Cellular Component: vacuole [IDA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: serine-type carboxypeptidase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTRGSCCL VNALIAIAFL ATAHLCEAGL SQKEQDKVSK LPGQNFNVSF AHYSGFVATN  60
   61 EQLGRALFYW LFEAVEDAKS KPLVLWLNGG PGCSSVAYGE AEEIGPFHIK ADGKTLYLNQ 120
  121 YSWNQAANIL FLDAPVGVGY SYSNTSSDLK SNGDKRTAED SLKFLLKWVE RFPEYKGRDF 180
  181 YIVGESYAGH YIPQLSEAIV KHNQGSDKNS INLKGYMVGN GLMDDFHDRL GLFQYIWSLG 240
  241 FISDQTYSLL QLQCGFESFI HSSKQCNKIL EIADKEIGNI DQYSVFTPAC VANASQSNML 300
  301 LKKRPMTSRV SEQYDPCTEK HTTVYFNLPE VQKALHVPPG LAPSKWDTCS DVVSEHWNDS 360
  361 PSSVLNIYHE LIAAGLRIWV FSGDADAVVP VTSTRYSIDA LNLRPLSAYG PWYLDGQVGG 420
  421 WSQQYAGLNF VTVRGAGHEV PLHRPKQALA LFKAFISGTP LSTHENSISR DMSELVSDS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..310] PSI-BLAST 89.69897 Serine carboxypeptidase II
    2 View Details [311..479] PSI-BLAST 48.221849 COMPLEX OF THE WHEAT SERINE CARBOXYPEPTIDASE, CPDW-II, WITH THE MICROBIAL PEPTIDE ALDEHYDE INHIBITOR, ANTIPAIN, AND ARGININE AT ROOM TEMPERATURE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  4.09944423676394 bayes_pls_golite062009
  • peptidase activity
    		•  2.49064988313037 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  2.11440496336538 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  2.10044305272656 bayes_pls_golite062009
  • palmitoyl-(protein) hydrolase activity
    		•  1.46950384675756 bayes_pls_golite062009
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.43631945855397 bayes_pls_golite062009
  • binding
    		•  0.351031277062254 bayes_pls_golite062009
  • palmitoyl-CoA hydrolase activity
    		•  0.1174692258176 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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