YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CLPR3_ARATH

General Information:
Name(s) found: CLPR3_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|79317437|ref|NP_001031008.1| ATP-dependent Clp protease proteolytic subunit, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|75301131|sp|Q8L770.1|CLPR3_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic; Short=ClpR3; AltName: Full=nClpP8; Flags: Precursor [NCBI NR]
  • gi|51971739|dbj|BAD44534.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana] [NCBI NR]
  • gi|51971625|dbj|BAD44477.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana] [NCBI NR]
  • gi|51971381|dbj|BAD44355.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana] [NCBI NR]
  • gi|51971379|dbj|BAD44354.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana] [NCBI NR]
  • gi|51971032|dbj|BAD44208.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana] [NCBI NR]
  • gi|51969858|dbj|BAD43621.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana] [NCBI NR]
  • gi|51969856|dbj|BAD43620.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana] [NCBI NR]
  • gi|51969676|dbj|BAD43530.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana] [NCBI NR]
  • gi|51968816|dbj|BAD43100.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana] [NCBI NR]
  • gi|51968776|dbj|BAD43080.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana] [NCBI NR]
  • gi|51968388|dbj|BAD42886.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana] [NCBI NR]
  • gi|25083963|gb|AAN72143.1| ATP-dependent Clp protease proteolytic subunit (ClpR3), putative [Arabidopsis thaliana] [NCBI NR]
  • gi|22531207|gb|AAM97107.1| ATP-dependent Clp protease proteolytic subunit (ClpR3), putative [Arabidopsis thaliana] [NCBI NR]
  • gi|18390982|ref|NP_563836.1| ATP-dependent Clp protease proteolytic subunit, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|110742786|dbj|BAE99296.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana] [NCBI NR]
  • ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1 [Swiss-Prot]
  • ATP-dependent Clp protease proteolytic subunit (ClpR3), putative [Arabidopsis thaliana]gi|51971739|dbj|BAD44534.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]gi|51971625|dbj|BAD44477.1| ClpP protease complex subunit ClpR3 [Arabidopsis tha [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 ATP-dependent Clp protease proteolytic subunit [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ATP-dependent Clp protease proteolytic subunit, putative | chr1:2940065-2942219 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ClpP protease complex subunit ClpR3 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATP-dependent Clp protease proteolytic subunit (ClpR3), putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • endopeptidase Clp [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | ATP-dependent caseinolytic (Clp) protease/crotonase family protein | chr1:2940063-2942217 REVERSE LENGTH=330 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 330 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    mitochondrion [IDA]
    chloroplast envelope [IDA]
    plastid stroma [IDA]
    thylakoid [IDA]
    Biological Process: proteolysis [IEA]
    Molecular Function: serine-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASCLQASMN SLLPRSSSFS PHPPLSSNSS GRRNLKTFRY AFRAKASAKI PMPPINPKDP  60
   61 FLSTLASIAA NSPEKLLNRP VNADVPPYLD IFDSPQLMSS PAQVERSVAY NEHRPRTPPP 120
  121 DLPSMLLDGR IVYIGMPLVP AVTELVVAEL MYLQWLDPKE PIYIYINSTG TTRDDGETVG 180
  181 MESEGFAIYD SLMQLKNEVH TVCVGAAIGQ ACLLLSAGTK GKRFMMPHAK AMIQQPRVPS 240
  241 SGLMPASDVL IRAKEVITNR DILVELLSKH TGNSVETVAN VMRRPYYMDA PKAKEFGVID 300
  301 RILWRGQEKI IADVVPSEEF DKNAGIKSVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..330] PSI-BLAST 65.69897 Crystallography and mutagenesis point to an essential role for the N-terminus of human mitochondrial ClpP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.46154163027498 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  0.939626895227199 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  0.764444938444292 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  0.621229080200493 bayes_pls_golite062009
  • enoyl-CoA hydratase activity
    		•  0.620657548610719 bayes_pls_golite062009
  • hydrolase activity
    		•  0.534319520590169 bayes_pls_golite062009
  • binding
    		•  0.367666848528835 bayes_pls_golite062009
  • ligase activity
    		•  0.32092496884003 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.53

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle