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Protein Overview: RCD1_ARATH

General Information:
Name(s) found: RCD1_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana GN=RCD1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 589 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][ISS]
    cytoplasm [IDA]
    Biological Process: embryonic development [IMP]
    response to salt stress [IMP]
    response to ozone [IMP]
    response to osmotic stress [IMP]
    ethylene mediated signaling pathway [IMP]
    response to superoxide [IMP]
    [NOT]response to hydrogen peroxide [IMP]
    jasmonic acid mediated signaling pathway [IMP]
    response to ethylene stimulus [IMP]
    response to water deprivation [IMP]
    response to oxidative stress [IGI]
    defense response to bacterium, incompatible interaction [IMP]
    nitric oxide biosynthetic process [IMP]
    programmed cell death [IMP]
    lateral root morphogenesis [IMP]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAKIVKVLD SSRCEDGFGK KRKRAASYAA YVTGVSCAKL QNVPPPNGQC QIPDKRRRLE  60
   61 GENKLSAYEN RSGKALVRYY TYFKKTGIAK RVMMYENGEW NDLPEHVICA IQNELEEKSA 120
  121 AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV 180
  181 EDPKQNAPHD IKLRLEIDVN GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE 240
  241 DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF 300
  301 SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY 360
  361 GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME LLRGDKAQFF SGGEEYDNGV 420
  421 DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ 480
  481 LESNQGARGS GSANSVGSST TRPKSPWMPF PTLFAAISHK VAENDMLLIN ADYQQLRDKK 540
  541 MTRAEFVRKL RVIVGDDLLR STITTLQNQP KSKEIPGSIR DHEEGAGGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] MSA 2.054982 View MSA. No confident structure predictions are available.
    2 View Details [119..465] PSI-BLAST 56.154902 THE CATALYTIC FRAGMENT OF POLY(ADP-RIBOSE) POLYMERASE COMPLEXED WITH CARBA-NAD
    3 View Details [466..589] MSA 3.02898 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle