| Protein: | RCD1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 589 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RCD1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
664.0 | [0..1] | [589..1] |
|
|
462.0 | [0..1] | [569..1] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MEAKIVKVLD SSRCEDGFGK KRKRAASYAA YVTGVSCAKL QNVPPPNGQC QIPDKRRRLE 60
61 GENKLSAYEN RSGKALVRYY TYFKKTGIAK RVMMYENGEW NDLPEHVICA IQNELEEK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [119-465] |
1 11 21 31 41 51
| | | | | |
1 SAAIEFKLCG HSFILDFLHM QRLDMETGAK TPLAWIDNAG KCFFPEIYES DERTNYCHHK 60
61 CVEDPKQNAP HDIKLRLEID VNGGETPRLN LEECSDESGD NMMDDVPLAQ RSSNEHYDEA 120
121 TEDSCSRKLE AAVSKWDETD AIVVSGAKLT GSEVLDKDAV KKMFAVGTAS LGHVPVLDVG 180
181 RFSSEIAEAR LALFQKQVEI TKKHRGDANV RYAWLPAKRE VLSAVMMQGL GVGGAFIRKS 240
241 IYGVGIHLTA ADCPYFSARY CDVDENGVRY MVLCRVIMGN MELLRGDKAQ FFSGGEEYDN 300
301 GVDDIESPKN YIVWNINMNT HIFPEFVVRF KLSNLPNAEG NLIAKRD
|
| Detection Method: | |
| Confidence: | 56.154902 |
| Match: | 1a26A |
| Description: | THE CATALYTIC FRAGMENT OF POLY(ADP-RIBOSE) POLYMERASE COMPLEXED WITH CARBA-NAD |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [466-589] |
1 11 21 31 41 51
| | | | | |
1 NSGVTLEGPK DLPPQLESNQ GARGSGSANS VGSSTTRPKS PWMPFPTLFA AISHKVAEND 60
61 MLLINADYQQ LRDKKMTRAE FVRKLRVIVG DDLLRSTITT LQNQPKSKEI PGSIRDHEEG 120
121 AGGL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
