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Protein Overview: BRM_ARATH

General Information:
Name(s) found: BRM_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 2193 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytosol [IDA]
    chromatin remodeling complex [IDA]
    Biological Process: ATP-dependent chromatin remodeling [NAS][TAS]
    organ boundary specification between lateral organs and the meristem [IGI]
    regulation of gene expression, epigenetic [IMP]
    Molecular Function: ATP binding [ISS]
    DNA binding [IDA][ISS]
    transcription regulator activity [ISS]
    helicase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ  60
   61 QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ QSRNFFESPQ QQQQQQQQGS 120
  121 STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP 180
  181 SSQPQASSSK PSGDQFARGE RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA 240
  241 QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV 300
  301 ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV 360
  361 NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE TPVLDQNAST KKSLGPAEHL 420
  421 QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR 480
  481 RLKKGEGSLP PELLQAISPP PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ 540
  541 AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD 600
  601 QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF 660
  661 FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK RTDSLKKING LLAKNLERKR 720
  721 IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR 780
  781 QVLANQKAVR EKQLKTIFQW RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG 840
  841 RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK 900
  901 NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT 960
  961 LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL NGILADEMGL GKTVQVMALI1020
 1021 AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK1080
 1081 FNVLVTTYEF IMYDRSKLSK VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP1140
 1141 LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL1200
 1201 HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA1260
 1261 QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK DFLVRSCGKL WILDRILIKL1320
 1321 QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF1380
 1381 LLSIRAAGRG LNLQTADTVV IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS1440
 1441 SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT1500
 1501 HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN1560
 1561 HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP GGPGGERKRG RPKSKKINYK1620
 1621 EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY1680
 1681 DYPPGSGSYK KNPPRDDAGS SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL1740
 1741 DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG1800
 1801 SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS1860
 1861 GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII QKRCKIVISK LQRRIDKEGQ1920
 1921 QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF1980
 1981 YGFSHEVRSE AKKVHNLFFD LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ2040
 2041 GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI2100
 2101 CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT2160
 2161 HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..651] PSI-BLAST 39.09691 No description for 1y0fB was found.
    2 View Details [652..721] deduced N/A No confident structure predictions are available.
    3 View Details [722..963] deduced N/A No confident structure predictions are available.
    4 View Details [964..1548] PSI-BLAST 145.0 Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54
    5 View Details [1549..1873] PSI-BLAST 34.69897 nucleosome recognition module of ISWI ATPase
    6 View Details [1874..2103] deduced N/A No confident structure predictions are available.
    7 View Details [2104..2193] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle