YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SCP43_ARATH

General Information:
Name(s) found: SCP43_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
SHOW ALL
  • Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 442 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: serine-type carboxypeptidase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSSRAVVMA IMVLVTVQWL VFAEGYPEED LVARLPGQPN VGFRQFAGYV DVDSENGRSL  60
   61 FYYYVEAVKE PDTKPLTLWL NGGPGCSSVG GGAFTELGPF YPTGDGRGLR LNSMSWNKAS 120
  121 NLLFVESPAG VGWSYSNRSS DYNTGDKSTV NDMLVFLLRW FNKFPELKSR DLFLTGESYA 180
  181 GHYIPQLADV ILSYNSRSSG FKFNVKGIAI GNPLLKLDRD FAAAYEYFWS HGMISDEVRL 240
  241 TIMNQCDFAN PKNMSNACIY AIVESSVLTE YINSYHILLD VCYPSIVQQE LRLKKMNALH 300
  301 ANRTRLPYEW TMCSNRLNYS GIDGYIDMLP SLKRIIQNQT PVWIFSGDQD SVIPLQSSRT 360
  361 LVRELAEDLN FKTTIPYGAW FHKEQVGGWV TEYGNLLTFA TVRGAAHMVP YAEPSRALHM 420
  421 FSSFMNGRRL PNKPDLKSST DD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..442] PSI-BLAST 104.0 Human 'protective protein', HPP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  4.09944423676394 bayes_pls_golite062009
  • peptidase activity
    		•  2.49064988313037 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  2.10044305272656 bayes_pls_golite062009
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • palmitoyl-(protein) hydrolase activity
    		•  1.3250951453762 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.35106325845064 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.282381128231187 bayes_pls_golite062009
  • thiolester hydrolase activity
    		•  0.22327746138619 bayes_pls_golite062009
  • palmitoyl-CoA hydrolase activity
    		•  0.1174692258176 bayes_pls_golite062009
  • binding
    		•  0.112743564301567 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle