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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP43_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSSRAVVMA IMVLVTVQWL VFAEGYPEED LVARLPGQPN VGFRQFAGYV DVDSENGRSL  60
   61 FYYYVEAVKE PDTKPLTLWL NGGPGCSSVG GGAFTELGPF YPTGDGRGLR LNSMSWNKAS 120
  121 NLLFVESPAG VGWSYSNRSS DYNTGDKSTV NDMLVFLLRW FNKFPELKSR DLFLTGESYA 180
  181 GHYIPQLADV ILSYNSRSSG FKFNVKGIAI GNPLLKLDRD FAAAYEYFWS HGMISDEVRL 240
  241 TIMNQCDFAN PKNMSNACIY AIVESSVLTE YINSYHILLD VCYPSIVQQE LRLKKMNALH 300
  301 ANRTRLPYEW TMCSNRLNYS GIDGYIDMLP SLKRIIQNQT PVWIFSGDQD SVIPLQSSRT 360
  361 LVRELAEDLN FKTTIPYGAW FHKEQVGGWV TEYGNLLTFA TVRGAAHMVP YAEPSRALHM 420
  421 FSSFMNGRRL PNKPDLKSST DD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle