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Protein Overview: DRP1B_ARATH

General Information:
Name(s) found: DRP1B_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 610 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: GTP binding [IEA][ISS]
    GTPase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLIALVNK IQRACTALGD HGEGSSLPTL WDSLPAIAVV GGQSSGKSSV LESVVGKDFL  60
   61 PRGAGIVTRR PLVLQLHRID EGKEYAEFMH LPKKKFTDFA AVRQEISDET DRETGRSSKV 120
  121 ISTVPIHLSI FSPNVVNLTL VDLPGLTKVA VDGQPESIVQ DIENMVRSFI EKPNCIILAI 180
  181 SPANQDLATS DAIKISREVD PKGDRTFGVL TKIDLMDQGT NAVDILEGRG YKLRYPWVGV 240
  241 VNRSQADINK SVDMIAARRR ERDYFQTSPE YRHLTERMGS EYLGKMLSKH LEVVIKSRIP 300
  301 GLQSLITKTI SELETELSRL GKPVAADAGG KLYMIMEICR AFDQTFKEHL DGTRSGGEKI 360
  361 NSVFDNQFPA AIKRLQFDKH LSMDNVRKLI TEADGYQPHL IAPEQGYRRL IESCLVSIRG 420
  421 PAEAAVDAVH SILKDLIHKS MGETSELKQY PTLRVEVSGA AVDSLDRMRD ESRKATLLLV 480
  481 DMESGYLTVE FFRKLPQDSE KGGNPTHSIF DRYNDAYLRR IGSNVLSYVN MVCAGLRNSI 540
  541 PKSIVYCQVR EAKRSLLDIF FTELGQKEMS KLSKLLDEDP AVQQRRTSIA KRLELYRSAQ 600
  601 TDIEAVAWSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..324] PSI-BLAST 102.0 Structure of the nucleotide-free myosin II motor domain from Dictyostelium discoideum fused to the GTPase domain of dynamin 1 from Rattus norvegicus
    2 View Details [325..507] Pfam 20.29243 No description for PF01031.11 was found. No confident structure predictions are available.
    3 View Details [508..610] Pfam 32.79588 No description for PF02212.9 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.751853066568728 bayes_pls_golite062009
  • catalytic activity
    		•  0.605053499033488 bayes_pls_golite062009
  • hydrolase activity
    		•  0.321203081600051 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.0849455401931427 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.0845975664628852 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.0838522238732389 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.0836101596443754 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle