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Protein Overview: PHR_ARATH

General Information:
Name(s) found: PHR_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Deoxyribodipyrimidine photo-lyase OS=Arabidopsis thaliana GN=PHR1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 496 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: photoreactive repair [IMP]
    UV protection [IMP]
    Molecular Function: DNA photolyase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTVSVQPG RIRILKKGSW QPLDQTVGPV VYWMFRDQRL KDNWALIHAV DLANRTNAPV  60
   61 AVVFNLFDQF LDAKARQLGF MLKGLRQLHH QIDSLQIPFF LLQGDAKETI PNFLTECGAS 120
  121 HLVTDFSPLR EIRRCKDEVV KRTSDSLAIH EVDAHNVVPM WAASSKLEYS ARTIRGKINK 180
  181 LLPDYLIEFP KLEPPKKKWT GMMDKKLVDW DSLIDKVVRE GAEVPEIEWC VPGEDAGIEV 240
  241 LMGNKDGFLT KRLKNYSTDR NNPIKPKALS GLSPYLHFGQ VSAQRCALEA RKVRSTSPQA 300
  301 VDTFLEELIV RRELSDNFCY YQPHYDSLKG AWEWARKSLM DHASDKREHI YSLEQLEKGL 360
  361 TADPLWNASQ LEMVYQGKMH GFMRMYWAKK ILEWTKGPEE ALSISIYLNN KYEIDGRDPS 420
  421 GYVGCMWSIC GVHDQGWKER PVFGKIRYMN YAGCKRKFNV DSYISYVKSL VSVTKKKRKA 480
  481 EEQLTRDSVD PKITIV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..496] PSI-BLAST 104.0 Structure of apophotolyase from Anacystis nidulans

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • DNA photolyase activity
    		•  2.69544443093614 bayes_pls_golite062009
  • deoxyribodipyrimidine photo-lyase activity
    		•  2.01343813518186 bayes_pls_golite062009
  • binding
    		•  0.638180097229557 bayes_pls_golite062009
  • catalytic activity
    		•  0.609980967042895 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.168445004685844 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.143448587511534 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle