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Protein Overview: gi|168242649, gi...

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..855] PSI-BLAST 1000.0 DNA repair protein MutS, domain III; DNA repair protein MutS, the C-terminal domain; DNA repair protein MutS, domain II; DNA repair protein MutS, domain I

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • mismatched DNA binding
  • 7.6300905919597 bayes_pls_golite062009
  • 6.67853997762091 bayes_pls_golite062009
  • guanine/thymine mispair binding
  • 6.45283004617788 bayes_pls_golite062009
  • DNA insertion or deletion binding
  • 6.26024791706598 bayes_pls_golite062009
  • single base insertion or deletion binding
  • 5.15853852267378 bayes_pls_golite062009
  • dinucleotide insertion or deletion binding
  • 4.09431251446007 bayes_pls_golite062009
  • oxidized purine DNA binding
  • 3.84835351634579 bayes_pls_golite062009
  • oxidized DNA binding
  • 3.84835351634579 bayes_pls_golite062009
  • single guanine insertion binding
  • 3.84835351634579 bayes_pls_golite062009
  • DNA secondary structure binding
  • 3.18179842526435 bayes_pls_golite062009
  • dinucleotide repeat insertion binding
  • 3.17347240690102 bayes_pls_golite062009
  • loop DNA binding
  • 3.13510929288157 bayes_pls_golite062009
  • mismatch repair complex binding
  • 2.99730753457176 bayes_pls_golite062009
  • single thymine insertion binding
  • 2.28303894489307 bayes_pls_golite062009
  • four-way junction DNA binding
  • 2.23712359726448 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 2.16381244011837 bayes_pls_golite062009
  • pyrophosphatase activity
  • 2.13284212711072 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 2.11265775498161 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 2.11046854230259 bayes_pls_golite062009
  • double-strand/single-strand DNA junction binding
  • 1.91034220759707 bayes_pls_golite062009
  • MutLalpha complex binding
  • 1.83584397705627 bayes_pls_golite062009
  • hydrolase activity
  • 1.66122526893602 bayes_pls_golite062009
  • binding
  • 1.62320027057768 bayes_pls_golite062009
  • ATPase activity
  • 1.53315090215319 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 1.1653223755451 bayes_pls_golite062009
  • Y-form DNA binding
  • 1.0681332518071 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • DNA helicase activity
  • 0.8104901979223 bayes_pls_golite062009
  • helicase activity
  • 0.701689608967233 bayes_pls_golite062009
  • nucleic acid binding
  • 0.503971340374059 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.269513772401086 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 0.146865639513637 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 0.146865639513637 bayes_pls_golite062009
  • double-stranded DNA binding
  • 0.11598665103566 bayes_pls_golite062009
  • nucleotide binding
  • 0.114848452385726 bayes_pls_golite062009
  • DNA binding
  • 0.111331583742205 bayes_pls_golite062009
  • purine nucleotide binding
  • 0.10713474095071 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 0.0916519414118148 bayes_pls_golite062009
  • ribonucleotide binding
  • 0.0915913646217636 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle