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Protein Overview: gi|190407139

General Information:
Name(s) found: gi|190407139 [NCBI NR]
Description(s) found:
  • gi|190407139|gb|EDV10406.1| type I transmembrane protein [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 203 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFATKFVI ACFLFFSASA HNVLLPAYGR RCFFEDLSKG DELSISFQFG DRNPQSSSQL  60
   61 TGDFIIYGPE RHEVLKTVRD TSHGEITLSA PYKGHFQYCF LNENTGIETK DVTFNIHGVV 120
  121 YVDLDDPNTN TLDSAVRKLS KLTREVKDEQ SYIVIRERTH RNTAESTNDR VKWWSIFQLG 180
  181 VVIANSLFQI YYLRRFFEVT SLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..203] Pfam 81.387216 emp24/gp25L/p24 family/GOLD No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • voltage-gated cation channel activity
    		•  2.66540214971227 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  2.66283817406605 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  2.65916906094646 bayes_pls_golite062009
  • channel activity
    		•  2.65916906094646 bayes_pls_golite062009
  • cation channel activity
    		•  2.62747969257897 bayes_pls_golite062009
  • potassium channel activity
    		•  2.61371256192732 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  2.60719363833593 bayes_pls_golite062009
  • ion channel activity
    		•  2.60082350471123 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  2.58448165457823 bayes_pls_golite062009
  • voltage-gated potassium channel activity
    		•  2.57450407680312 bayes_pls_golite062009
  • gated channel activity
    		•  2.51455369837435 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.48447488950861 bayes_pls_golite062009
  • ligand-gated ion channel activity
    		•  2.48200622858578 bayes_pls_golite062009
  • ligand-gated channel activity
    		•  2.48200622858578 bayes_pls_golite062009
  • transporter activity
    		•  2.35657262831396 bayes_pls_golite062009
  • clathrin binding
    		•  2.30826135071113 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.25147059981728 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.22751878261824 bayes_pls_golite062009
  • binding
    		•  2.16129867759095 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.14804562881998 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.08500207462933 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.02275538762334 bayes_pls_golite062009
  • inward rectifier potassium channel activity
    		•  1.9397436784802 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.58932339453245 bayes_pls_golite062009
  • signal transducer activity
    		•  1.58932339453245 bayes_pls_golite062009
  • protein binding
    		•  1.40069187357924 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.921436605338431 bayes_pls_golite062009
  • actin binding
    		•  0.852579554611056 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle