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Protein Overview: gi|116779721, gi...

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..136] PSI-BLAST 57.69897 Crystal structure of the nucleosome core particle containing the histone domain of macroH2A

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • general RNA polymerase II transcription factor activity
  • 6.43582244485566 bayes_pls_golite062009
  • DNA binding
  • 4.49118409263799 bayes_pls_golite062009
  • nucleic acid binding
  • 4.35201412176948 bayes_pls_golite062009
  • transcription regulator activity
  • 4.08606081850613 bayes_pls_golite062009
  • binding
  • 3.27510691458843 bayes_pls_golite062009
  • centromeric DNA binding
  • 2.60445660474495 bayes_pls_golite062009
  • transcription factor activity
  • 2.51581622888695 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 2.38228606466152 bayes_pls_golite062009
  • transcription repressor activity
  • 2.3574713307436 bayes_pls_golite062009
  • transcription initiation factor activity
  • 1.57176056919918 bayes_pls_golite062009
  • transcription corepressor activity
  • 1.30859203490073 bayes_pls_golite062009
  • histone acetyltransferase activity
  • 1.30425023787663 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
  • 1.30425023787663 bayes_pls_golite062009
  • transcription activator activity
  • 1.25487495162413 bayes_pls_golite062009
  • transcription factor binding
  • 1.15204005455906 bayes_pls_golite062009
  • transcription coactivator activity
  • 1.1297723528047 bayes_pls_golite062009
  • protein binding
  • 1.07873333188144 bayes_pls_golite062009
  • transcription cofactor activity
  • 1.01502031330902 bayes_pls_golite062009
  • histone binding
  • 0.218942897869955 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.0852726470007639 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle