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Protein Overview: gi|190409839

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..154] deduced N/A No confident structure predictions are available.
2 View Details [155..293] PSI-BLAST 2.045757 V(D)J recombination activating protein 1 (RAG1), dimerization domain
3 View Details [294..386] deduced N/A No confident structure predictions are available.
4 View Details [387..551] MSA 3.105962 View MSA. No confident structure predictions are available.
5 View Details [392..551] MSA 7.15898 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4
Term Confidence Notes
  • ubiquitin-protein ligase activity
  • 5.65442784325159 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 5.55686022186257 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 4.59153177011595 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 3.07217714843839 bayes_pls_golite062009
  • binding
  • 2.19426901055464 bayes_pls_golite062009
  • protein binding
  • 1.62051249360163 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
  • 1.2126425713931 bayes_pls_golite062009
  • ubiquitin-specific protease activity
  • 1.03469202541773 bayes_pls_golite062009
  • nucleic acid binding
  • 0.708499177773075 bayes_pls_golite062009
  • ligase activity
  • 0.63517530468004 bayes_pls_golite062009
  • transcription regulator activity
  • 0.553991532499653 bayes_pls_golite062009
  • cysteine-type peptidase activity
  • 0.50197530717959 bayes_pls_golite062009
  • ubiquitin thiolesterase activity
  • 0.265769062717221 bayes_pls_golite062009
  • DNA binding
  • 0.227671243150662 bayes_pls_golite062009
  • hydrolase activity
  • 0.156835837705934 bayes_pls_golite062009
  • catalytic activity
  • 0.14112008370434 bayes_pls_golite062009
  • peptidase activity
  • 0.121357659741468 bayes_pls_golite062009
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle