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Protein Overview: gi|190409085

General Information:
Name(s) found: gi|190409085 [NCBI NR]
Description(s) found:
  • gi|190409085|gb|EDV12350.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 330 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPANLFPG LNDITDVLEE FPLATSRYLT LLHEIDAKCV HSMPNLNERI DKFLKKDFNK  60
   61 DHQTQVRLLN NINKIYEELM PSLEEKMHVS SIMLDNLDRL TSRLELAYEV AIKNTEIPRG 120
  121 LRLGVDNHPA MHLHHELMEK IESKSNSKSS QALKSESRRE AMAANRRQGE HYSASTHQQD 180
  181 DSKNDANYGG SRHESQDHTG NNTNSRKRAN AANTNNADPE TKKRKRRVAT TAVSPSTIST 240
  241 ATAVNNGRIG TSTASRGVSS VGNSNNSRIS RPKTNDYGEP LYCYCNQVAY GEMVGCDGAD 300
  301 CELEWFHLPC IGLETLPKGK WYCDDCKKKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..35]
    [81..207]    		 ORFEUS 7.33 Variant surface glycoprotein (N-terminal domain)
    2 View Details [36..80] ORFEUS 7.33 Variant surface glycoprotein (N-terminal domain)
    3 View Details [208..273] deduced N/A No confident structure predictions are available.
    4 View Details [274..330] PSI-BLAST 5.69897 Williams-Beuren syndrome transcription factor, WSTF

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • protein deacetylase activity
    		•  7.50578521120904 bayes_pls_golite062009
  • histone deacetylase activity
    		•  7.35162059871663 bayes_pls_golite062009
  • histone acetyltransferase activity
    		•  7.10262960897544 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
    		•  7.10262960897544 bayes_pls_golite062009
  • deacetylase activity
    		•  6.55925777139018 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  5.24378850198774 bayes_pls_golite062009
  • N-acetyltransferase activity
    		•  5.0952093808777 bayes_pls_golite062009
    		• 4.75659254650148 bayes_pls_golite062009
  • N-acyltransferase activity
    		•  4.73470737654883 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  4.39452339322141 bayes_pls_golite062009
  • acetyltransferase activity
    		•  4.29938591960121 bayes_pls_golite062009
  • methylated histone residue binding
    		•  4.19057851212315 bayes_pls_golite062009
  • acyltransferase activity
    		•  3.59302841227183 bayes_pls_golite062009
    		• 3.57133019761926 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  3.54892905221507 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  3.34035867339622 bayes_pls_golite062009
  • histone binding
    		•  3.01402804224903 bayes_pls_golite062009
  • binding
    		•  2.78627791259335 bayes_pls_golite062009
  • nucleosome binding
    		•  1.69494047037058 bayes_pls_golite062009
  • protein binding
    		•  1.6308789519356 bayes_pls_golite062009
  • chromatin binding
    		•  1.0360039180364 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.01735624308761 bayes_pls_golite062009
  • DNA binding
    		•  0.896491359501813 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.723245820583374 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.655033722565177 bayes_pls_golite062009
  • kinase activity
    		•  0.596989785523293 bayes_pls_golite062009
  • histone methyltransferase activity
    		•  0.476506467104495 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.465950484314184 bayes_pls_golite062009
  • protein kinase activity
    		•  0.405766438875014 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.327424740985033 bayes_pls_golite062009
  • transferase activity
    		•  0.245705939593188 bayes_pls_golite062009
  • histone methyltransferase activity (H3-K4 specific)
    		•  0.0490968711985191 bayes_pls_golite062009
  • histone acetyl-lysine binding
    		•  0.0410393640547611 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle