Protein Overview: gi|190408427

General Information:
Name(s) found:	gi\|190408427 [NCBI NR]
Description(s) found:	gi\|190408427\|gb\|EDV11692.1\| DNA repair protein RAD14 [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
Organism:	Saccharomyces cerevisiae RM11-1a
Length:	371 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPEQKAKLE ANRKLAIERL RKRGILSSDQ LNRIESRNEP LKTRPLAVTS GSNRDDNAAA  60
   61 AVHVPNHNGQ PSALANTNTN TTSLYGSGVV DGSKRDASVL DKRPTDRIRP SIRKQDYIEY 120
  121 DFATMQNLNG GYINPKDKLP NSDFTDDQEF ESEFGSKKQK TLQDWKKEQL ERKMLYENAP 180
  181 PPEHISKAPK CIECHINIEM DPVLHDVFKL QVCKQCSKEH PEKYALLTKT ECKEDYFLTD 240
  241 PELNDEDLFH RLEKPNPHSG TFARMQLFVR CEVEAFAFKK WGGEEGLDEE WQRREEGKAH 300
  301 RREKKYEKKI KEMRLKTRAQ EYTNRLREKK HGKAHIHHFS DPVDGGIDED GYQIQRRRCT 360
  361 DCGLETEEID I

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..186]	Pfam	43.958607	XPA protein N-terminal No confident structure predictions are available.
2	View Details	[187..371]	PSI-BLAST	135.30103	DNA repair factor XPA DNA- and RPA-binding domain, C-terminal subdomain; DNA repair factor XPA DNA- and RPA-binding domain, N-terminal subdomain

Functions predicted (by domain):

#

Gene Ontology predictions

1

No functions predicted.

2

Term	Confidence	Notes
binding	2.81621967469952	bayes_pls_golite062009
transcription regulator activity	2.20400142735918	bayes_pls_golite062009
DNA binding	2.18702281581791	bayes_pls_golite062009
nucleic acid binding	2.04270847321412	bayes_pls_golite062009
protein binding	1.60194768638501	bayes_pls_golite062009
transcription factor activity	1.44182975349714	bayes_pls_golite062009
sequence-specific DNA binding	0.71242082351425	bayes_pls_golite062009
transcription activator activity	0.612819891085	bayes_pls_golite062009
structure-specific DNA binding	0.610805977602876	bayes_pls_golite062009
RNA polymerase II transcription factor activity	0.51536225088963	bayes_pls_golite062009
ligand-dependent nuclear receptor activity	0.44426709732278	bayes_pls_golite062009
transcription factor binding	0.40850395411512	bayes_pls_golite062009
double-stranded DNA binding	0.280685154942276	bayes_pls_golite062009
catalytic activity	0.101795606736461	bayes_pls_golite062009
general RNA polymerase II transcription factor activity	0.0268930241866703	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle