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Protein Overview: gi|190404676

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..226] MSA 2.007945 View MSA. No confident structure predictions are available.
2 View Details [227..334] deduced N/A No confident structure predictions are available.
3 View Details [335..454] Pfam 50.086186 ERCC4 domain No confident structure predictions are available.
4 View Details [455..632] MSA 3.038979 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • DNA-directed DNA polymerase activity
  • 3.46780352518677 bayes_pls_golite062009
  • DNA polymerase activity
  • 3.42429084792579 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 1.8990253905448 bayes_pls_golite062009
  • catalytic activity
  • 0.585392957294978 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • four-way junction helicase activity
  • 10.562254984301 bayes_pls_golite062009
  • DNA helicase activity
  • 7.81641089090703 bayes_pls_golite062009
  • endodeoxyribonuclease activity
  • 3.88121538069074 bayes_pls_golite062009
  • single-stranded DNA specific endodeoxyribonuclease activity
  • 3.87045877570028 bayes_pls_golite062009
  • deoxyribonuclease activity
  • 3.62965779224499 bayes_pls_golite062009
  • excinuclease ABC activity
  • 3.48615352002265 bayes_pls_golite062009
  • DNA binding
  • 2.97855002479178 bayes_pls_golite062009
  • structure-specific DNA binding
  • 2.83758378400856 bayes_pls_golite062009
  • nucleic acid binding
  • 2.79236389919005 bayes_pls_golite062009
  • single-stranded DNA binding
  • 2.79104877030658 bayes_pls_golite062009
  • damaged DNA binding
  • 2.3008149920351 bayes_pls_golite062009
  • helicase activity
  • 2.29491252701513 bayes_pls_golite062009
  • binding
  • 2.17324322139334 bayes_pls_golite062009
  • nuclease activity
  • 1.92659045080864 bayes_pls_golite062009
  • endonuclease activity
  • 1.7109181764667 bayes_pls_golite062009
  • DNA strand annealing activity
  • 1.5117854648336 bayes_pls_golite062009
  • pyrophosphatase activity
  • 1.02983374615445 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
  • 1.02325715570644 bayes_pls_golite062009
  • catalytic activity
  • 0.816447099398022 bayes_pls_golite062009
  • double-stranded DNA binding
  • 0.73359455482295 bayes_pls_golite062009
  • protein binding
  • 0.71091195096997 bayes_pls_golite062009
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle