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Protein Overview: gi|95147306, gi|...

General Information:
Name(s) found: gi|95147306 [NCBI NR]
gi|22328106 [NCBI NR]
gi|110736177 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|95147306|gb|ABF57288.1| At5g65760 [Arabidopsis thaliana] [NCBI NR]
  • gi|22328106|ref|NP_201377.2| serine carboxypeptidase S28 family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110736177|dbj|BAF00060.1| lysosomal Pro-X carboxypeptidase [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 515 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    vacuole [IDA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: serine-type peptidase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASHFCLLLI FTFFTLVFPS NGSSLSSSKL LPRFPRYTFQ NREARIQQFR GDRNEYRYET  60
   61 KFFSQQLDHF SFADLPKFSQ RYLINSDHWL GASALGPIFL YCGNEGDIEW FATNSGFIWD 120
  121 IAPKFGALLV FPEHRYYGES MPYGSREEAY KNATTLSYLT TEQALADFAV FVTDLKRNLS 180
  181 AEACPVVLFG GSYGGMLAAW MRLKYPHIAI GALASSAPIL QFEDVVPPET FYDIASNDFK 240
  241 RESSSCFNTI KDSWDAIIAE GQKENGLLQL TKTFHFCRVL NSTDDLSDWL DSAYSYLAMV 300
  301 DYPYPADFMM PLPGHPIREV CRKIDGAGSN ASILDRIYAG ISVYYNYTGN VDCFKLDDDP 360
  361 HGLDGWNWQA CTEMVMPMSS NQENSMFPGY GFNYSSYKEE CWNTFRVNPR PKWVTTEFGG 420
  421 HDIATTLKSF GSNIIFSNGL LDPWSGGSVL KNLSDTIVAL VTKEGAHHLD LRPSTPEDPK 480
  481 WLVDQREAEI RLIQGWIETY RVEKEAKVSL LKRSW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..68] PSI-BLAST 6.0 No description for 2hdwA was found.
    2 View Details [69..360] PSI-BLAST 38.39794 Proline aminopeptidase
    3 View Details [361..515] MSA 4.242977 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrolase activity
    		•  3.13500795029724 bayes_pls_golite062009
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.560001331598537 bayes_pls_golite062009
  • peptidase activity
    		•  0.49210021845334 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.204622919291197 bayes_pls_golite062009
  • structural molecule activity
    		•  0.151914509834157 bayes_pls_golite062009
  • binding
    		•  0.112743564301567 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle