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Protein Overview: DGP15_ARATH

General Information:
Name(s) found: DGP15_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Putative Do-like 15 protein OS=Arabidopsis thaliana GN=DEGP15 PE=3 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 198 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: proteolysis [ISS]
    Molecular Function: catalytic activity [IEA]
    serine-type endopeptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNQVNDISY VSLIQVNIVL NKNIILWLGS ATPRALRDID LAQDSVVKIF SFSREPNVVQ  60
   61 PWQTTEKEYS SSGFAISGRR ILTNAHVVGD HSYLQVRKHG SPTKYKAEVK AFGIFGARRY 120
  121 TFIGETIYAL GYPRDGDIIS VTKGIVTRVE PQKYAHSSIE ILTIQTDACI NGGKSGGPVV 180
  181 MGNKVAGVVF ENDSPSDK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..198] PSI-BLAST 39.045757 Protease Do (DegP, HtrA), catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.879220468838319 bayes_pls_golite062009
  • hydrolase activity
    		•  0.83105139693348 bayes_pls_golite062009
  • peptidase activity
    		•  0.81546887337164 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.5672666868164 bayes_pls_golite062009
  • serine hydrolase activity
    		•  0.50826037975448 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  0.508252655710209 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.264500844139819 bayes_pls_golite062009
  • serine-type endopeptidase activity
    		•  0.201782736081951 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle