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Protein Overview: gi|15239655

General Information:
Name(s) found: gi|15239655 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|15239655|ref|NP_197412.1| extracellular dermal glycoprotein-related / EDGP-related [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 405 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: proteolysis [IEA]
    Molecular Function: aspartic-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSLTRLLV FLSIFAAIAL KSNSQYLLPI TKHEPTNLFY TTFNVGSAAK SPVNLLLDLG  60
   61 TNLTWLDCRK LKSLSSLRLV TCQSSTCKSI PGNGCAGKSC LYKQPNPLGQ NPVVTGRVVQ 120
  121 DRASLYTTDG GKFLSQVSVR HFTFSCAGEK ALQGLPPPVD GVLALSPGSS SFTKQVTSAF 180
  181 NVIPKFSLCL PSSGTGHFYI AGIHYFIPPF NSSDNPIPRT LTPIKGTDSG DYLITVKSIY 240
  241 VGGTALKLNP DLLTGGAKLS TVVHYTVLQT DIYNALAQSF TLKAKAMGIA KVPSVAPFKH 300
  301 CFDSRTAGKN LTAGPNVPVI EIGLPGRIGE VKWGFYGANT VVKVKETVMC LAFIDGGKTP 360
  361 KDLMVIGTHQ LQDHMLEFDF SGTVLAFSES LLLHNTSCST WPSQK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..405] PSI-BLAST 30.39794 Crystal Structure of the Triticum aestivum xylanase inhibitor I

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.01508543827677 bayes_pls_golite062009
  • hydrolase activity
    		•  0.77554493777157 bayes_pls_golite062009
  • peptidase activity
    		•  0.68518523369811 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.43925265235199 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.43264884039584 bayes_pls_golite062009
  • aspartic-type endopeptidase activity
    		•  0.30585066730542 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  0.30585066730542 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle