YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15239655
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSLTRLLV FLSIFAAIAL KSNSQYLLPI TKHEPTNLFY TTFNVGSAAK SPVNLLLDLG  60
   61 TNLTWLDCRK LKSLSSLRLV TCQSSTCKSI PGNGCAGKSC LYKQPNPLGQ NPVVTGRVVQ 120
  121 DRASLYTTDG GKFLSQVSVR HFTFSCAGEK ALQGLPPPVD GVLALSPGSS SFTKQVTSAF 180
  181 NVIPKFSLCL PSSGTGHFYI AGIHYFIPPF NSSDNPIPRT LTPIKGTDSG DYLITVKSIY 240
  241 VGGTALKLNP DLLTGGAKLS TVVHYTVLQT DIYNALAQSF TLKAKAMGIA KVPSVAPFKH 300
  301 CFDSRTAGKN LTAGPNVPVI EIGLPGRIGE VKWGFYGANT VVKVKETVMC LAFIDGGKTP 360
  361 KDLMVIGTHQ LQDHMLEFDF SGTVLAFSES LLLHNTSCST WPSQK

Type	Start	End	Confidence
Signal Peptide	1	24	0.96
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	405	0.99