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Protein Overview: gi|42572963

General Information:
Name(s) found: gi|42572963 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|42572963|ref|NP_974578.1| disease resistance protein (TIR class), putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 249 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    defense response [ISS]
    Molecular Function: transmembrane receptor activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMPAFRRRP RPQIYISFQG NDLRKGFVSH VVKALKDARV NVFVDNDHDQ WERRGPHHHD  60
   61 DHLFVRRIHN SKLALVIFSD QYAESQQCLN ELTTIHERVA EGKLMVIPIF YKVNIEEVNN 120
  121 LEGRFGKCFD EMVRTQGRQN HQLTHHIVGC LRSIARKPSF TSGYYSNDSD LVEAIIQGIK 180
  181 KKIPYISAKQ TIGEEVSAEL LSASVVAALC FYFIPISVFP DLGFFISPRW YLAVMLLFVV 240
  241 RHSLRSIQR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] PSI-BLAST 22.39794 Toll-like receptor 1, TLR1
    2 View Details [165..249] MSA 32.276997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.261666574457319 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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