YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42572963
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMPAFRRRP RPQIYISFQG NDLRKGFVSH VVKALKDARV NVFVDNDHDQ WERRGPHHHD  60
   61 DHLFVRRIHN SKLALVIFSD QYAESQQCLN ELTTIHERVA EGKLMVIPIF YKVNIEEVNN 120
  121 LEGRFGKCFD EMVRTQGRQN HQLTHHIVGC LRSIARKPSF TSGYYSNDSD LVEAIIQGIK 180
  181 KKIPYISAKQ TIGEEVSAEL LSASVVAALC FYFIPISVFP DLGFFISPRW YLAVMLLFVV 240
  241 RHSLRSIQR

Type	Start	End	Confidence
Cytoplasmic	1	195	0.94
Transmembrane Helix	196	216	0.86
Non-Cytoplasmic	217	225	0.66
Transmembrane Helix	226	244	0.88
Cytoplasmic	245	249	0.88