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Protein Overview: CERK1_ARATH

General Information:
Name(s) found: CERK1_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Chitin elicitor receptor kinase 1 OS=Arabidopsis thaliana GN=CERK1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 617 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: defense response to fungus, incompatible interaction [IMP]
    detection of molecule of fungal origin [IEP][IMP]
    response to chitin [IMP]
    Molecular Function: transmembrane receptor protein kinase activity [IDA]
    receptor signaling protein activity [IDA]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKISLIAP ILLLFSFFFA VESKCRTSCP LALASYYLEN GTTLSVINQN LNSSIAPYDQ  60
   61 INFDPILRYN SNIKDKDRIQ MGSRVLVPFP CECQPGDFLG HNFSYSVRQE DTYERVAISN 120
  121 YANLTTMESL QARNPFPATN IPLSATLNVL VNCSCGDESV SKDFGLFVTY PLRPEDSLSS 180
  181 IARSSGVSAD ILQRYNPGVN FNSGNGIVYV PGRDPNGAFP PFKSSKQDGV GAGVIAGIVI 240
  241 GVIVALLLIL FIVYYAYRKN KSKGDSFSSS IPLSTKADHA SSTSLQSGGL GGAGVSPGIA 300
  301 AISVDKSVEF SLEELAKATD NFNLSFKIGQ GGFGAVYYAE LRGEKAAIKK MDMEASKQFL 360
  361 AELKVLTRVH HVNLVRLIGY CVEGSLFLVY EYVENGNLGQ HLHGSGREPL PWTKRVQIAL 420
  421 DSARGLEYIH EHTVPVYVHR DIKSANILID QKFRAKVADF GLTKLTEVGG SATRGAMGTF 480
  481 GYMAPETVYG EVSAKVDVYA FGVVLYELIS AKGAVVKMTE AVGEFRGLVG VFEESFKETD 540
  541 KEEALRKIID PRLGDSYPFD SVYKMAELGK ACTQENAQLR PSMRYIVVAL STLFSSTGNW 600
  601 DVGNFQNEDL VSLMSGR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] PSI-BLAST 12.09691 Polygalacturonase inhibiting protein PGIP
    2 View Details [155..263] FFAS03 1.06 No description for 2djpA was found.
    3 View Details [264..617] PSI-BLAST 67.154902 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • receptor activity
    		•  3.83269261081332 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  3.75945815830294 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  3.09281229196379 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.99319600166105 bayes_pls_golite062009
  • signal transducer activity
    		•  2.99319600166105 bayes_pls_golite062009
  • binding
    		•  1.87302803330255 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
    		•  1.50579173120225 bayes_pls_golite062009
  • protein kinase activity
    		•  1.43632437878638 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.16530645523007 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.12585418084562 bayes_pls_golite062009
  • kinase activity
    		•  1.11577341189523 bayes_pls_golite062009
  • transmembrane receptor protein tyrosine kinase activity
    		•  0.925064573334258 bayes_pls_golite062009
  • protein binding
    		•  0.646159692466759 bayes_pls_golite062009
  • receptor binding
    		•  0.596307412859703 bayes_pls_golite062009
  • transferase activity
    		•  0.435331931559158 bayes_pls_golite062009
  • protein-hormone receptor activity
    		•  0.42902267001067 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.370391722473665 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  0.231213253402712 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.154501444195573 bayes_pls_golite062009
  • growth factor binding
    		•  0.0358215683345522 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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