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Protein Overview: gi|42571079, gi|...

General Information:
Name(s) found: gi|42571079 [NCBI NR]
gi|110737616 [NCBI NR]
Description(s) found:
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  • gi|42571079|ref|NP_973613.1| aspartyl protease family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110737616|dbj|BAF00749.1| putative protease [Arabidopsis thaliana] [NCBI NR]
  • aspartyl protease family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Aspartyl protease family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | aspartyl protease family protein | chr2:15372028-15375095 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protease [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • pepsin A [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Eukaryotic aspartyl protease family protein | chr2:15364949-15368016 REVERSE LENGTH=507 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Aspartyl protease-like protein OS=Arabidopsis thaliana GN=At2g36670 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4INZ4, Eukaryotic aspartyl protease family protein OS=Arabidopsis thaliana GN=At2g36670 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 507 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEA]
    Molecular Function: aspartic-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTLRSLMLA AALAVALAVT GFAASPLPSA YAKYAAGPTK ILPLQRAFPL DELVELSELR  60
   61 ARDRVRHARI LLGGGRQSSV GGVVDFPVQG SSDPYLVGLY FTKVKLGSPP TEFNVQIDTG 120
  121 SDILWVTCSS CSNCPHSSGL GIDLHFFDAP GSLTAGSVTC SDPICSSVFQ TTAAQCSENN 180
  181 QCGYSFRYGD GSGTSGYYMT DTFYFDAILG ESLVANSSAP IVFGCSTYQS GDLTKSDKAV 240
  241 DGIFGFGKGK LSVVSQLSSR GITPPVFSHC LKGDGSGGGV FVLGEILVPG MVYSPLVPSQ 300
  301 PHYNLNLLSI GVNGQMLPLD AAVFEASNTR GTIVDTGTTL TYLVKEAYDL FLNAISNSVS 360
  361 QLVTPIISNG EQCYLVSTSI SDMFPSVSLN FAGGASMMLR PQDYLFHYGI YDGASMWCIG 420
  421 FQKAPEEQTI LGDLVLKDKV FVYDLARQRI GWASYDCSMS VNVSITSGKD IVNSGQPCLN 480
  481 ISTRDILIRL FFSILFGLLL CIFFSLT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..507] PSI-BLAST 75.09691 REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.01508543827677 bayes_pls_golite062009
  • hydrolase activity
    		•  0.77554493777157 bayes_pls_golite062009
  • peptidase activity
    		•  0.68518523369811 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.43925265235199 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.43264884039584 bayes_pls_golite062009
  • aspartic-type endopeptidase activity
    		•  0.30585066730542 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  0.30585066730542 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle