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Protein Overview: gi|55670856, gi|...

General Information:
Name(s) found: gi|55670856 [NCBI NR]
gi|55670855 [NCBI NR]
gi|55670854 [NCBI NR]
gi|55670853 [NCBI NR]
Description(s) found:
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  • gi|55670856|pdb|1XG5|D Chain D, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp [NCBI NR]
  • gi|55670855|pdb|1XG5|C Chain C, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp [NCBI NR]
  • gi|55670854|pdb|1XG5|B Chain B, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp [NCBI NR]
  • gi|55670853|pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp [NCBI NR]
  • Chain D, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadpgi|55670855|pdb|1XG5|C Chain C, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadpgi|55670854|pdb|1XG5|B Chain B, Structure Of Human Putative Dehydrogenas [nrdb_11152004_Chlamydomonas]
  • Chain D, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Chain C, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Chain B, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
    • Organism: Homo sapiens
    Length: 279 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSSHHHHHHS SGRENLYFQG HMARPGMERW RDRLALVTGA SGGIGAAVAR ALVQQGLKVV  60
   61 GCARTVGNIE ELAAECKSAG YPGTLIPYRC DLSNEEDILS MFSAIRSQHS GVDICINNAG 120
  121 LARPDTLLSG STSGWKDMFN VNVLALSICT REAYQSMKER NVDDGHIINI NSMSGHRVLP 180
  181 LSVTHFYSAT KYAVTALTEG LRQELREAQT HIRATCISPG VVETQFAFKL HDKDPEKAAA 240
  241 TYEQMKCLKP EDVAEAVIYV LSTPAHIQIG DIQMRPTGS

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|112491310 gi|219109210, gi... gi|55670856, gi|...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..279] PSI-BLAST 54.0 Structure of human putative dehydrogenase MGC4172 in complex with NADP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • retinol dehydrogenase activity
    		•  4.1750549780559 bayes_pls_golite062009
  • oxidoreductase activity
    		•  3.09625241707629 bayes_pls_golite062009
  • 3-hydroxyacyl-CoA dehydrogenase activity
    		•  3.06391460989761 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  3.02758902218302 bayes_pls_golite062009
  • ethanol binding
    		•  3.01624801418439 bayes_pls_golite062009
  • retinol binding
    		•  2.89007863838685 bayes_pls_golite062009
  • L-iditol 2-dehydrogenase activity
    		•  2.85461175493562 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  2.344389379767 bayes_pls_golite062009
  • structural molecule activity
    		•  2.31813292180084 bayes_pls_golite062009
  • benzaldehyde dehydrogenase activity
    		•  2.03039843216597 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • steroid dehydrogenase activity
    		•  1.75109362865449 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.65338499044318 bayes_pls_golite062009
  • steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.55012034958204 bayes_pls_golite062009
  • L-arabinitol 2-dehydrogenase activity
    		•  1.54130379492877 bayes_pls_golite062009
  • alcohol binding
    		•  1.51091775360793 bayes_pls_golite062009
  • all-trans retinal binding
    		•  1.47861183836779 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.47309297191111 bayes_pls_golite062009
  • NADPH:quinone reductase activity
    		•  1.28547163855437 bayes_pls_golite062009
  • fatty acid synthase activity
    		•  1.23679054027553 bayes_pls_golite062009
  • sorbose reductase activity
    		•  1.06293597394863 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  1.01627645289834 bayes_pls_golite062009
  • binding
    		•  0.982999356179965 bayes_pls_golite062009
  • transporter activity
    		•  0.793769336118517 bayes_pls_golite062009
  • retinal dehydrogenase activity
    		•  0.69372321031969 bayes_pls_golite062009
  • alcohol dehydrogenase (NAD) activity
    		•  0.65743456407889 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.635891484075352 bayes_pls_golite062009
  • 3-oxoacyl-[acyl-carrier-protein] reductase activity
    		•  0.604742541607263 bayes_pls_golite062009
  • 3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity
    		•  0.583772223704381 bayes_pls_golite062009
  • testosterone 17-beta-dehydrogenase activity
    		•  0.532187027260366 bayes_pls_golite062009
  • DNA binding
    		•  0.525227236870065 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.459537641913493 bayes_pls_golite062009
  • NAD or NADH binding
    		•  0.44922383360529 bayes_pls_golite062009
  • enoyl-CoA hydratase activity
    		•  0.439912268968251 bayes_pls_golite062009
  • coenzyme binding
    		•  0.35922330382799 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.300373102236296 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.239024094835991 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.177044638410302 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.165260811069909 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.0868063468469216 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.0257250793986203 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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