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Protein Overview: gi|10120782, gi|...

General Information:
Name(s) found: gi|10120784 [NCBI NR]
gi|10120782 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|10120784|pdb|1EG4|A Chain A, Structure Of A Dystrophin Ww Domain Fragment In Complex With A Beta-Dystroglycan Peptide [NCBI NR]
  • gi|10120782|pdb|1EG3|A Chain A, Structure Of A Dystrophin Ww Domain Fragment In Complex With A Beta-Dystroglycan Peptide [NCBI NR]
    • Organism: Homo sapiens
    Length: 261 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPASQHFLST SVQGPWERAI SPNKVPYYIN HETQTTCWDH PKMTELYQSL ADLNNVRFSA  60
   61 YRTAMKLRRL QKALCLDLLS LSAACDALDQ HNLKQNDQPM DILQIINCLT TIYDRLEQEH 120
  121 NNLVNVPLCV DMCLNWLLNV YDTGRTGRIR VLSFKTGIIS LCKAHLEDKY RYLFKQVASS 180
  181 TGFCDQRRLG LLLHDSIQIP RQLGEVASFG GSNIEPSVRS CFQFANNKPE IEAALFLDWM 240
  241 RLEPQSMVWL PVLHRVAAAE T

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|10120782, gi|... gi|112491310

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..261] PSI-BLAST 75.522879 Dystrophin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of muscle
    		•  5.54109779906915 bayes_pls_golite062009
  • acetylcholine transmembrane transporter activity
    		•  3.43985481301683 bayes_pls_golite062009
  • transcription regulator activity
    		•  3.2682543222543 bayes_pls_golite062009
  • binding
    		•  2.62219069341981 bayes_pls_golite062009
  • transcription activator activity
    		•  2.28375305944516 bayes_pls_golite062009
  • transcription factor binding
    		•  2.18630749239417 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.11906774871731 bayes_pls_golite062009
  • metal ion binding
    		•  2.11094352721028 bayes_pls_golite062009
  • cation binding
    		•  2.11094352721028 bayes_pls_golite062009
  • ion binding
    		•  2.10331783734535 bayes_pls_golite062009
  • transcription cofactor activity
    		•  2.07432061489599 bayes_pls_golite062009
  • transcription coactivator activity
    		•  2.02433252968502 bayes_pls_golite062009
  • actin binding
    		•  2.02356543483094 bayes_pls_golite062009
  • DNA binding
    		•  1.73924929536227 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.53225451586959 bayes_pls_golite062009
  • protein binding
    		•  1.46903005775608 bayes_pls_golite062009
  • calcium ion binding
    		•  1.40919295397643 bayes_pls_golite062009
  • myosin binding
    		•  1.23881879879813 bayes_pls_golite062009
  • motor activity
    		•  1.08123526270094 bayes_pls_golite062009
  • nitric-oxide synthase binding
    		•  0.965098383344279 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.933783050059916 bayes_pls_golite062009
  • signal transducer activity
    		•  0.933783050059916 bayes_pls_golite062009
  • microfilament motor activity
    		•  0.71766448962378 bayes_pls_golite062009
  • structural molecule activity
    		•  0.640474644163009 bayes_pls_golite062009
  • actin filament binding
    		•  0.512173584028638 bayes_pls_golite062009
  • myosin II heavy chain binding
    		•  0.308481284245779 bayes_pls_golite062009
  • catalytic activity
    		•  0.210712504691113 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.209763469645099 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.18603158355229 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.183123873014372 bayes_pls_golite062009
  • myosin heavy chain binding
    		•  0.15875878144391 bayes_pls_golite062009
  • actin-dependent ATPase activity
    		•  0.1582139439683 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle