| Protein: | gi|26387510, gi|... |
| Organism: | Mus musculus |
| Length: | 289 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|26387510, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
329.0 | [0..1] | [289..1] |
|
|
320.0 | [0..7] | [289..71] |
|
|
311.0 | [0..1] | [289..65] |
|
|
308.0 | [0..10] | [289..1] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MAATAATVNG STTVSSSGPA ATSVGILQAA AGMYEQLKDE WNRKNPNLSK CGEELGRLKL 60
61 VLLELNFLPT TGTKLTKQQL ILARDILEIG AQWSILCKDI PSFERYMAQL KCYYFDYKEQ 120
121 LPESAYMHQL LGLNLLFLLS QNRVAEFHTE LERLPAKDIQ
|
| Detection Method: |  |
| Confidence: | 4.275724 |
| Match: | PF03399.7 |
| Description: | No description for PF03399.7 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [161-289] |
1 11 21 31 41 51
| | | | | |
1 TNVYIKHPVS LEQYLMEGSY NKVFLAKGNI PAESYTFFID ILLDTIRDEI AGCIEKAYEK 60
61 ILFAEATRIL FFSTPKKMTD YAKKRGWVLG PNNYYSFASQ QQKPEDSTIP FTELAKQVIE 120
121 YARQLEMIV
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1rz4A |
| Description: | Crystal Structure of Human eIF3k |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.50995556050336 | bayes_pls_golite062009 |
| nucleic acid binding | 3.38144578566524 | bayes_pls_golite062009 |
| binding | 3.33026160538031 | bayes_pls_golite062009 |
| DNA binding | 3.30822066787723 | bayes_pls_golite062009 |
| transcription factor activity | 2.60537570879007 | bayes_pls_golite062009 |
| hydrolase activity | 2.30467124306022 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.32971938164691 | bayes_pls_golite062009 |
| transcription activator activity | 1.08566311616647 | bayes_pls_golite062009 |
| transcription repressor activity | 0.95491822926452 | bayes_pls_golite062009 |
| protein binding | 0.653872239015235 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.42135864069093 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.136726704233672 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.118016217031359 | bayes_pls_golite062009 |
