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Protein Overview: gi|26387510, gi|...

General Information:
Name(s) found: gi|27229063 [NCBI NR]
gi|26387510 [NCBI NR]
Description(s) found:
Found 6 descriptions.
SHOW ALL
  • gi|27229063|ref|NP_080821.2| proteasome 26S non-ATPase subunit 8 [Mus musculus] [NCBI NR]
  • gi|26387510|dbj|BAB32006.2| unnamed protein product [Mus musculus] [NCBI NR]
    • Organism: Mus musculus
    Length: 289 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAATVNG STTVSSSGPA ATSVGILQAA AGMYEQLKDE WNRKNPNLSK CGEELGRLKL  60
   61 VLLELNFLPT TGTKLTKQQL ILARDILEIG AQWSILCKDI PSFERYMAQL KCYYFDYKEQ 120
  121 LPESAYMHQL LGLNLLFLLS QNRVAEFHTE LERLPAKDIQ TNVYIKHPVS LEQYLMEGSY 180
  181 NKVFLAKGNI PAESYTFFID ILLDTIRDEI AGCIEKAYEK ILFAEATRIL FFSTPKKMTD 240
  241 YAKKRGWVLG PNNYYSFASQ QQKPEDSTIP FTELAKQVIE YARQLEMIV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] Pfam 4.275724 No description for PF03399.7 was found. No confident structure predictions are available.
    2 View Details [161..289] PSI-BLAST 3.69897 Crystal Structure of Human eIF3k

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  3.50995556050336 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.38144578566524 bayes_pls_golite062009
  • binding
    		•  3.33026160538031 bayes_pls_golite062009
  • DNA binding
    		•  3.30822066787723 bayes_pls_golite062009
  • transcription factor activity
    		•  2.60537570879007 bayes_pls_golite062009
  • hydrolase activity
    		•  2.30467124306022 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.32971938164691 bayes_pls_golite062009
  • transcription activator activity
    		•  1.08566311616647 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.95491822926452 bayes_pls_golite062009
  • protein binding
    		•  0.653872239015235 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.42135864069093 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
    		•  0.136726704233672 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  0.118016217031359 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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