| Protein: | bl-PA, FBpp0307711 |
| Organism: | Drosophila melanogaster |
| Length: | 496 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bl-PA, FBpp0307711.
| Description | E-value | Query Range |
Subject Range |
|
|
235.0 | [0..131] | [445..1472] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MKREMNDEGE GPQDQKRNRR NEETVRILIP SSIAGAVIGK GGQHIQKMRT QYKATVSVDD 60
61 SQGPERTIQI SADIESTLEI ITEMLKYFEE RDEDFDVRLL IHQSLAGCVI GKGGQKIKEI 120
121 RDRIGCRFLK V
|
| Detection Method: |  |
| Confidence: | 28.0 |
| Match: | 2annA |
| Description: | No description for 2annA was found. |
|
Region A: Residues: [132-427] |
1 11 21 31 41 51
| | | | | |
1 FSNVAPQSTD RVVQTVGKQS QVIEAVREVI TLTRDTPIKG AIHNYDPMNF DRVYADEYGG 60
61 YGTGSGSTRP SQRGNNRNGG GAGGVAGGAA GGNGGGFNAG GARGNAGGRG GADRFGGAAG 120
121 GAVAGAGMGQ RDNPFINPWA NGGGGDVDGF GNNAGGAGGF AGNSFGGGAG GPFGGGSFGN 180
181 NGFGGGPSDF GGNSGNFGQA QGTNSLPSLG SFSQNQGGTS SLPSLGSFGQ NPGGPGGLGN 240
241 GLSGGANGGV GTLGGANGAG GFNAVGGANG GPNGSPNAAT NVPQGHDPNN STQVTI
|
| Detection Method: | |
| Confidence: | 19.69897 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [428-496] |
1 11 21 31 41 51
| | | | | |
1 PKELAGAIIG KGGGRIRRIR NESSAYITID EPLPNSNDRI ITISGTPKQI QMAQYLLQQS 60
61 VHENGRRNI
|
| Detection Method: | |
| Confidence: | 16.221849 |
| Match: | 1j5kA |
| Description: | HnRNP K, KH3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 6.76415077523249 | bayes_pls_golite062009 |
| mRNA binding | 5.07455187994216 | bayes_pls_golite062009 |
| nucleic acid binding | 4.78650555542715 | bayes_pls_golite062009 |
| binding | 3.45962790790935 | bayes_pls_golite062009 |
| 2.87067043110488 | bayes_pls_golite062009 | |
| transcription regulator activity | 2.28364833275102 | bayes_pls_golite062009 |
| poly-pyrimidine tract binding | 2.05765562493656 | bayes_pls_golite062009 |
| DNA binding | 2.03207983673692 | bayes_pls_golite062009 |
| transcription factor activity | 1.30278154718684 | bayes_pls_golite062009 |
| protein binding | 1.16541072642796 | bayes_pls_golite062009 |
| single-stranded RNA binding | 0.981003625136521 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.489176583045793 | bayes_pls_golite062009 |
| transcription repressor activity | 0.392035003865213 | bayes_pls_golite062009 |
| transcription activator activity | 0.324382863054631 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.32222928997178 | bayes_pls_golite062009 |
| transcription factor binding | 0.254024117548226 | bayes_pls_golite062009 |
| catalytic activity | 0.113112541746059 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.1069917291606 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0321875054165348 | bayes_pls_golite062009 |
