| Protein: | bl-PC |
| Organism: | Drosophila melanogaster |
| Length: | 502 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bl-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
247.0 | [0..114] | [451..1450] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MTKRLRMKRE MNDEGEGPQD QKRNRRNEET VRILIPSSIA GAVIGKGGQH IQKMRTQYKA 60
61 TVSVDDSQGP ERTIQISADI ESTLEIITEM LKYFEERDED FDVRLLIHQS LAGCVIGKGG 120
121 QKIKEIRDRI GC
|
| Detection Method: |  |
| Confidence: | 26.39794 |
| Match: | 2annA |
| Description: | No description for 2annA was found. |
|
Region A: Residues: [133-443] |
1 11 21 31 41 51
| | | | | |
1 RFLKVFSNVA PQSTDRVVQT VGKQSQVIEA VREVITLTRD TPIKGAIHNY DPMNFDRVYA 60
61 DEYGGYGTGS GSTRPSQRGN NRNGGGAGGV AGGAAGGNGG GFNAGGARGN AGGRGGADRF 120
121 GGAAGGAVAG AGMGQRDNPF INPWANGGGG DVDGFGNNAG GAGGFAGNSF GGGAGGPFGG 180
181 GSFGNNGFGG GPSDFGGNSG NFGQAQGTNS LPSLGSFSQN QGGTSSLPSL GSFGQNPGGP 240
241 GGLGNGLSGG ANGGVGTLGG ANGAGGFNAV GGANGGPNGS PNAATNVPQG HDPNNSTQVT 300
301 IPKELAGAII G
|
| Detection Method: | |
| Confidence: | 22.154902 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [444-502] |
1 11 21 31 41 51
| | | | | |
1 KGGGRIRRIR NESSAYITID EPLPNSNDRI ITISGTPKQI QMAQYLLQQS VHENGRRNI
|
| Detection Method: | |
| Confidence: | 16.39794 |
| Match: | 1j5kA |
| Description: | HnRNP K, KH3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 6.76415077523249 | bayes_pls_golite062009 |
| mRNA binding | 5.07455187994216 | bayes_pls_golite062009 |
| nucleic acid binding | 4.78650555542715 | bayes_pls_golite062009 |
| binding | 3.45962790790935 | bayes_pls_golite062009 |
| 2.87067043110488 | bayes_pls_golite062009 | |
| transcription regulator activity | 2.28364833275102 | bayes_pls_golite062009 |
| poly-pyrimidine tract binding | 2.05765562493656 | bayes_pls_golite062009 |
| DNA binding | 2.03207983673692 | bayes_pls_golite062009 |
| transcription factor activity | 1.30278154718684 | bayes_pls_golite062009 |
| protein binding | 1.16541072642796 | bayes_pls_golite062009 |
| single-stranded RNA binding | 0.981003625136521 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.489176583045793 | bayes_pls_golite062009 |
| transcription repressor activity | 0.392035003865213 | bayes_pls_golite062009 |
| transcription activator activity | 0.324382863054631 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.32222928997178 | bayes_pls_golite062009 |
| transcription factor binding | 0.254024117548226 | bayes_pls_golite062009 |
| catalytic activity | 0.113112541746059 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.1069917291606 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0321875054165348 | bayes_pls_golite062009 |
