| Protein: | FBpp0306393, e(y... |
| Organism: | Drosophila melanogaster |
| Length: | 2006 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0306393, e(y....
| Description | E-value | Query Range |
Subject Range |
|
|
667.0 | [0..191] | [2006..28] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MNDLRQQQMV AATSSSGSES GTAVESAAAT STAGSAGAAG RPQSNCSANS NAKSVAASST 60
61 SEEEQRVSST SSPAQRDQQL NADRDREQ
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [89-250] |
1 11 21 31 41 51
| | | | | |
1 EPEPQQQQQR EEALQHQHNQ PGHITSTTAS PPPTLPPPTT PCDDAPSTTG ASASASSASG 60
61 EAPSAASAAG AAGGPMAATA LEVESEERDG HKIILKLSKH ANPNSNANES QPGGDERRVE 120
121 PLRIQLPCGG AEGGLVAKQQ DAFDADASSC SSSCAEDEVA TT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [251-458] |
1 11 21 31 41 51
| | | | | |
1 LGQQLRNTPH IVPKLTIRAA NERRVGSVVP KLTIKLPENP AASGSNSNSG SCSAAVSGAQ 60
61 SAMPAKNDAH LSSLSPASAS SSSASSSSSS SSSSSLAEMQ TVPKLMIKTT LAGSSCISSS 120
121 EELPQQQQQI PKLTIKTGGG GQEHVHTVIM THDLNNAQSI PKLTIKTKSI EMIEDEQAAK 180
181 LEQQLQPLPK LTIKNLCSPK HKVRAVLE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [459-640] |
1 11 21 31 41 51
| | | | | |
1 EKPPTAASKL AIPKPTPNPT PAPMTNGGES NSSSQEFCGF SDPDADIAAP ASDDVRRNSD 60
61 DMVIDDSLSK EHDPKIFHNL PPMPASNGIA SGGSKASKAS KSAQSQHNVV DMVDLTSSPS 120
121 PGSSPTHVPN NFTGRISPKG LLIDCLRMQT AIGCYVPEEA DSRVRPAASP NSNILLSQLT 180
181 AP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [641-768] |
1 11 21 31 41 51
| | | | | |
1 AKSFTTTTPK SKSSKYPQLT ERLMANGSGT GGGSVIAAES EAVVGPLPAA NPAQSIIESI 60
61 EILDTPDGSP RVAYMDEDSN PMLNKHLQTI HKLAMDHGVE QRMDTQDNNN ENHLKRTNSE 120
121 GNESPSSR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [769-902] |
1 11 21 31 41 51
| | | | | |
1 LPPSKQRRLD NDENDQQTQN CHDPARKCSE SLQALPPSHR SRKQKHERIL NTDLEGSLFP 60
61 PTQQQSISTP DQNGALSSEV EGEDAKAQDP LEPATPQPPP VATPAGTGKK RGRPKRIQNQ 120
121 SSPDGGGAVT PKPG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [903-1027] |
1 11 21 31 41 51
| | | | | |
1 TPQEEANSAV KSRRVQLLRK RLAIDMVSVG QEQADMKAKE KESSVGVPNA RVEDGLAETL 60
61 ESPKTRDHRP LRATRRTTTS TNTNLQPTPK STRKRQSKAS VQQSQLPPPT MAQFGSSESE 120
121 SNNNN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1028-1087] |
1 11 21 31 41 51
| | | | | |
1 NSSISFALSA QIDLTMCSSS SSTSSGAAAN QQVIGGSGSS SMLPPTTILS SSDPLPDVIF 60
61
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1088-1284] |
1 11 21 31 41 51
| | | | | |
1 QPNDFSSIMA TQQLRSSRPS SISCGSTGGS QPDCHDEDNY TSALDNSGDE TALPMPPTRG 60
61 RGRGRRSRGG RGRGSSSVDR AVSVGGTAST TPATQPRAPR MSRGASAVAK AIAMSRPRCV 120
121 GGLKHQPDPE RLKGLFSPSP QVFEEDTRMS ADLSNSNQSM ASLMEPPLTP QKQPDFLNNE 180
181 ESQSSMVSNV SMMDSNQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1285-1353] |
1 11 21 31 41 51
| | | | | |
1 GQSADAILGS ALKRPKKKKM ETCVAEDTDY SASSIAEYDW PPPKGCCPSK NRDTFMIQEQ 60
61 VALYLGITS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1354-1583] |
1 11 21 31 41 51
| | | | | |
1 FKRKYPDLPR RSVDMEERNW LQEKGLVSEK LCDLGITAVW ASDILDIMYA DFFDKYEEYK 60
61 EYIRRKHLRE IEAKQKALGL TVGAGRGLQA RDRAMLSATK WNAYFNKSRK DERQSCMDLQ 120
121 TFTINQPQPR TAPTCTRLER STSDLIRAVA EEANIPAPPN LLPPRDYDEA FRNSDYAYPL 180
181 TVVPDQFSMA YRQFEPAELR AYPLDTALDK PPTDLMAQLL QAKSEAVGSD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1584-1726] |
1 11 21 31 41 51
| | | | | |
1 EIKTSAPAPK DLGQEQSAIK SVTVTAPVRR SRRSTRQQTD KVRTASSSST SSAQSVSSAS 60
61 SGNGSSSDTE SGDESDFSST SSCSSSTGAS SGAGSEDEDG NECSSSVRLS TCGVCLRSQH 120
121 RNARDMPEAF IRCYTCRKRV HPS
|
| Detection Method: | |
| Confidence: | 5.045757 |
| Match: | 2cshA |
| Description: | Solution structure of tandem repeat of the zf-C2H2 domains of human zinc finger protein 297B |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.70988788192472 | bayes_pls_golite062009 |
| nucleic acid binding | 4.58713908116892 | bayes_pls_golite062009 |
| DNA binding | 4.56219307357342 | bayes_pls_golite062009 |
| transcription activator activity | 3.52873291636993 | bayes_pls_golite062009 |
| transcription factor activity | 3.50954949535763 | bayes_pls_golite062009 |
| transcription repressor activity | 3.27542149084008 | bayes_pls_golite062009 |
| binding | 3.10743787485868 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.53101891154822 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.31369346002275 | bayes_pls_golite062009 |
| protein binding | 2.05530362750351 | bayes_pls_golite062009 |
| chromatin binding | 1.53640935908107 | bayes_pls_golite062009 |
| transcription factor binding | 1.39608963544799 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.34049786451995 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.0497955246512 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.77874411480713 | bayes_pls_golite062009 |
| catalytic activity | 0.245893663605433 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 0.10146306852499 | bayes_pls_golite062009 |
|
Region A: Residues: [1727-1864] |
1 11 21 31 41 51
| | | | | |
1 CVDMPPRMVG RVRNYNWQCA GCKCCIKCRS SQRPGKMLYC EQCDRGYHIY CLGLRTVPDG 60
61 RWSCERCCFC MRCGATKPEG LPQVAALSQA SGGPSANGDR SKAARNKRLK WVHEYRIDHV 120
121 TKIREHAAMF CVPCARNK
|
| Detection Method: | |
| Confidence: | 20.30103 |
| Match: | 2ysmA |
| Description: | No description for 2ysmA was found. |
|
Region A: Residues: [1865-2006] |
1 11 21 31 41 51
| | | | | |
1 PAKRQSAAGA AGAAAVTPVL EATSAQTDDS PMPSPGLTTN GGRALSPTAA LSPKAAVPVA 60
61 SLPPVLEATT VTTNIAGTIG RRQAGNAVNI TTMQCSSSSS SNFSGNGVTE DAANVTATGT 120
121 ATAAAGAPAA TPIGIAPPPV VA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
