| Protein: | CG17922-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1040 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG17922-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
355.0 | [0..460] | [998..149] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MTSMARFRKV NRQSEKLEPE ASASLLKSSP NILENFAYDE FQPIQTNHPL LKRMATTPVA 60
61 QSGSQSSSSS TSSTRKAEPK FCDTLERHAF MRNVIN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [97-306] |
1 11 21 31 41 51
| | | | | |
1 QQPESTRRYS TPGEKEAQVR RSLEEITKDL KEIEQFVSAT EELMQREKEQ EQMMYSNKEN 60
61 KCPSPVKRVT YKINAYKAPP RRHRPGSPRF YHSRLYFRNG KIGCVDSTEH QNNVGATHAL 120
121 VKHILHHEKP LVSPDSVRRV LEQDSFEMVP LPGAVPEIVP DPIAIQRAEE LAAATGQVVL 180
181 PKEEEEEEKS SPLHQVESQP DVDEDEQDVQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [307-742] |
1 11 21 31 41 51
| | | | | |
1 ICYNESPELQ NEDRNERTQR TPSINESEIV AVDEPDTEMN SDVDHRKPSS AGSLDSQGQQ 60
61 FLRDQVRHLV RRFTARANKV KSRIELPPTP SSSSTVSSPS PPPTKSLHPS PQHKVRLVPA 120
121 GQSPHRGRLF EADTPRSNVW LCSSLCGANN DERTLDPQGK IYISWLCVVS LSFLYNAWVI 180
181 PLRASFPFQT KENTNIWLAC DFCADIIYLL DVVFFKHRVM YLFEGFWVKN KNLTRKNYMR 240
241 KLQFKLDLLA LLPLELLYFK LGTQAVWLRF PRFFKIQSFW EVFRLLDRVI SSPHFVRVAK 300
301 TLTYMLYMIH ITAALYYAYS DYQGLGQNRW VFSGKGHPYV RCFAFATKTA TSIGKNPKPE 360
361 RQGEYVFMTV AWLMGVFVFA LLIGQIRDII STATRNKHEY RQLEDETLEY MRRLNLSQEV 420
421 QSRVKMWFQF TWEQQR
|
| Detection Method: | |
| Confidence: | 27.0 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [743-915] |
1 11 21 31 41 51
| | | | | |
1 TLDESNILDA LPINLKTDIA ISVHIQTLSK VQLFADCEEA LLRDLVLKLR AVTFLPGDFV 60
61 CRKGEVGREM YIVKLGQVQV MGGPSSDVVL ATLTEGSVFG EISLLGINGA DRRTADVRSK 120
121 GYSNLFVLSK SDLNEVIAYY PTAQAILKKR ARQLMRKNAA REREEERERA RSA
|
| Detection Method: | |
| Confidence: | 31.522879 |
| Match: | 1q3eA |
| Description: | HCN2J 443-645 in the presence of cGMP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cyclic nucleotide-gated ion channel activity | 10.1422916734545 | bayes_pls_golite062009 |
| intracellular cyclic nucleotide activated cation channel activity | 10.1422916734545 | bayes_pls_golite062009 |
| intracellular ligand-gated ion channel activity | 9.72053268940283 | bayes_pls_golite062009 |
| intracellular cGMP activated cation channel activity | 9.19973076787954 | bayes_pls_golite062009 |
| ion channel activity | 8.54258173089828 | bayes_pls_golite062009 |
| gated channel activity | 8.40583491856766 | bayes_pls_golite062009 |
| channel activity | 8.39905773163311 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 8.39905773163311 | bayes_pls_golite062009 |
| substrate-specific channel activity | 8.39470084162975 | bayes_pls_golite062009 |
| cation channel activity | 8.37340171056317 | bayes_pls_golite062009 |
| cGMP binding | 7.7575871125398 | bayes_pls_golite062009 |
| ligand-gated channel activity | 7.41584542512987 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 7.41584542512987 | bayes_pls_golite062009 |
| cyclic nucleotide binding | 7.37322432929433 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 7.27305202954784 | bayes_pls_golite062009 |
| GMP binding | 5.49455172024846 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 4.92543918512794 | bayes_pls_golite062009 |
| voltage-gated channel activity | 4.90247452112447 | bayes_pls_golite062009 |
| intracellular cAMP activated cation channel activity | 3.95109938608832 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 3.17407714154852 | bayes_pls_golite062009 |
| potassium channel activity | 3.16645830461177 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.68223244325599 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.45301353888223 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 2.42821009576643 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.29036912617062 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.1888705807099 | bayes_pls_golite062009 |
| binding | 1.39247933044015 | bayes_pls_golite062009 |
| protein binding | 0.71319432010926 | bayes_pls_golite062009 |
| molecular transducer activity | 0.685020633246238 | bayes_pls_golite062009 |
| signal transducer activity | 0.685020633246238 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.362412435891451 | bayes_pls_golite062009 |
| transporter activity | 0.0214385136840991 | bayes_pls_golite062009 |
|
Region A: Residues: [916-1040] |
1 11 21 31 41 51
| | | | | |
1 LQADVVIGNP KTPETAPKLL QTVIQALPFE SPAVVLITRG SKRMRRKRQS VQMETIVEPK 60
61 MEVTGAAETQ DQKGLKTGRC SPDLLSSIQQ ELKSKHKFIN LTDSEKALIS QSANNSLEDM 120
121 KVVDL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
