| Protein: | fd3F-PB |
| Organism: | Drosophila melanogaster |
| Length: | 360 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fd3F-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
169.0 | [0..4] | [335..368] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MWLKSKTNHR KTSRPKKPPF TYTELIEYAL EDKGELTVSG IYQWISDRFP YYKSNDDRWK 60
61 NSVRHNLSIN PHFRKGVKAP QGAGHLWAIS SGDSAENVLA WEHKK
|
| Detection Method: |  |
| Confidence: | 33.154902 |
| Match: | 1d5vA |
| Description: | Adipocyte-transcription factor FREAC-11 (s12, fkh-14) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.55329976718261 | bayes_pls_golite062009 |
| DNA binding | 5.08959163553491 | bayes_pls_golite062009 |
| nucleic acid binding | 4.99681957904233 | bayes_pls_golite062009 |
| transcription factor activity | 4.33152142980289 | bayes_pls_golite062009 |
| transcription activator activity | 3.70589483230587 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.58179858678904 | bayes_pls_golite062009 |
| binding | 3.52874320222492 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.60738445921725 | bayes_pls_golite062009 |
| transcription repressor activity | 2.22485867684613 | bayes_pls_golite062009 |
| protein binding | 1.80415286835431 | bayes_pls_golite062009 |
| transcription factor binding | 0.85714789329232 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.66743181561551 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 0.23177057841536 | bayes_pls_golite062009 |
|
Region A: Residues: [106-214] |
1 11 21 31 41 51
| | | | | |
1 QRLDLFFKME SINRERIQQH QQQQQLQQHQ QQHQQHSPQQ KQHSAAQQQH MPQASSCMYD 60
61 EAAVAVATLT QEMMQTNSGG GSTETSQQQQ QQQQHHHHHS HQNHQNHNQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [215-360] |
1 11 21 31 41 51
| | | | | |
1 HHQRLLPFND LLSDDELRKT AGQILNGIHR EVEVQSVNSI ISTYHDVLLD NDYLNPIHKD 60
61 VVVTESVLRQ QHGTNLGGGN NNQNNQMGGN SHMGGGNSQY YITEIDPMEL GIQMSHQVEP 120
121 SEEEVLFSDE FNLNYFGYNP GSDIVA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
