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View Structure Prediction Details

Protein: TPP2
Organism: Homo sapiens
Length: 1249 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TPP2.

Description E-value Query
Range
Subject
Range
gi|4507657, gi|1... - gi|4507657|ref|NP_003282.1| tripeptidyl peptidase II [Homo sapiens], gi|339880|gb|AAA36760.1| tripep...
0.0 [1..1249] [1..1249]
gi|114650557, gi... - gi|114650557|ref|XP_001151667.1| PREDICTED: tripeptidyl peptidase II [Pan troglodytes], gi|114650555...
0.0 [1..1249] [1..1249]
gi|37194903 - gi|37194903|gb|AAH58239.1| Tpp2 protein [Mus musculus]
0.0 [1..1249] [1..1249]
TPP2_RAT - Tripeptidyl-peptidase 2 OS=Rattus norvegicus GN=Tpp2 PE=2 SV=3
0.0 [1..1249] [1..1249]
gi|119904854, gi... - gi|76631850|ref|XP_604411.2| PREDICTED: similar to Tripeptidyl-peptidase 2 (Tripeptidyl-peptidase II...
0.0 [1..1249] [1..1249]

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Predicted Domain #1
Region A:
Residues: [1-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAATEEPF PFHGLLPKKE TGAASFLCRY PEYDGRGVLI AVLDTGVDPG APGMQVTTDG  60
   61 KPKIVDIIDT TGSGDVNTAT EVEPKDGEIV GLSGRVLKIP ASWTNPSGKY HIGIKNGYDF 120
  121 YPKALKERIQ KERKEKIWDP VHRVALAEAC RKQEEFDVAN NGSSQANKLI KEELQSQVEL 180
  181 LNSFEKKYSD PGPVYDCLVW HDGEVWRACI DSNEDGDLSK STVLRNYKEA QEYGSFGTAE 240
  241 MLNYSVNIYD DGNLLSIVTS GGAHGTHVAS IAAGHFPEEP ERNGVAPGAQ ILSIKIGDTR 300
  301 LSTMETGTGL IRAMIEVINH KCDLVNYSYG EATHWPNSGR ICEVINEAVW KHNIIYVSSA 360
  361 GNNGPCLSTV GCPGGTTSSV IGVGAYVSPD MMVAEYSLRE KLPANQYTWS SRGPSADGAL 420
  421 GVSISAPGGA IASVPNWTLR GTQLMNGTSM SSPNACGGIA LILSGLKANN IDYTVHSVRR 480
  481 ALENTAVKAD NIEVFAQGHG IIQVDKAYDY LVQNTSFA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.69897
Match: 1r6vA
Description: Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 3.80926331563638 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 3.44676270522493 bayes_pls_golite062009
endopeptidase activity 2.34981838083066 bayes_pls_golite062009
hydrolase activity 1.91868221854892 bayes_pls_golite062009
serine hydrolase activity 1.90036575189745 bayes_pls_golite062009
serine-type peptidase activity 1.89198766955068 bayes_pls_golite062009
serine-type endopeptidase activity 1.23150012549143 bayes_pls_golite062009
catalytic activity 0.597535457699629 bayes_pls_golite062009
binding 0.38308887521311 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [519-644]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKLGFTVTVG NNRGIYLRDP VQVAAPSDHG VGIEPVFPEN TENSEKISLQ LHLALTSNSS  60
   61 WVQCPSHLEL MNQCRHINIR VDPRGLREGL HYTEVCGYDI ASPNAGPLFR VPITAVIAAK 120
  121 VNESSH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.69897
Match: 1p8jA
Description: Furin, C-terminal domain; Furin, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 3.80926331563638 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 3.44676270522493 bayes_pls_golite062009
endopeptidase activity 2.34981838083066 bayes_pls_golite062009
hydrolase activity 1.91868221854892 bayes_pls_golite062009
serine hydrolase activity 1.90036575189745 bayes_pls_golite062009
serine-type peptidase activity 1.89198766955068 bayes_pls_golite062009
serine-type endopeptidase activity 1.23150012549143 bayes_pls_golite062009
catalytic activity 0.597535457699629 bayes_pls_golite062009
binding 0.38308887521311 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [645-729]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YDLAFTDVHF KPGQIRRHFI EVPEGATWAE VTVCSCSSEV SAKFVLHAVQ LVKQRAYRSH  60
   61 EFYKFCSLPE KGTLTEAFPV LGGKA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [730-1249]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IEFCIARWWA SLSDVNIDYT ISFHGIVCTA PQLNIHASEG INRFDVQSSL KYEDLAPCIT  60
   61 LKNWVQTLRP VSAKTKPLGS RDVLPNNRQL YEMVLTYNFH QPKSGEVTPS CPLLCELLYE 120
  121 SEFDSQLWII FDQNKRQMGS GDAYPHQYSL KLEKGDYTIR LQIRHEQISD LERLKDLPFI 180
  181 VSHRLSNTLS LDIHENHSFA LLGKKKSSNL TLPPKYNQPF FVTSLPDDKI PKGAGPGCYL 240
  241 AGSLTLSKTE LGKKADVIPV HYYLIPPPTK TKNGSKDKEK DSEKEKDLKE EFTEALRDLK 300
  301 IQWMTKLDSS DIYNELKETY PNYLPLYVAR LHQLDAEKER MKRLNEIVDA ANAVISHIDQ 360
  361 TALAVYIAMK TDPRPDAATI KNDMDKQKST LVDALCRKGC ALADHLLHTQ AQDGAISTDA 420
  421 EGKEEEGESP LDSLAETFWE TTKWTDLFDN KVLTFAYKHA LVNKMYGRGL KFATKLVEEK 480
  481 PTKENWKNCI QLMKLLGWTH CASFTENWLP IMYPPDYCVF 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.2
Match: 2gw1A
Description: No description for 2gw1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle