Protein: | gi|151946418 |
Organism: | Saccharomyces cerevisiae YJM789 |
Length: | 394 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|151946418.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..393] | [1..391] |
|
0.0 | [1..393] | [1..391] |
|
0.0 | [1..393] | [1..391] |
|
0.0 | [19..391] | [1..363] |
|
0.0 | [19..391] | [1..363] |
|
0.0 | [19..391] | [1..363] |
|
0.0 | [19..391] | [1..363] |
|
0.0 | [1..394] | [1..394] |
Region A: Residues: [1-204] |
1 11 21 31 41 51 | | | | | | 1 MPPKKQVEEK KVLLGRPGNN LKAGIVGLAN VGKSTFFQAI TRCPLGNPAN YPFATIDPEE 60 61 ARVIVPSPRF DKLCEIYKKT ASEVPAHLTV YDIAGLTKGA SAGEGLGNAF LSHIRSVDSI 120 121 YQVVRCFDDA EIIHVEGDVD PVRDLEIINQ ELRLKDIEFA QKALEGAEKI AKRGGQSLEV 180 181 KQKKEEMDLI TKIIKLLESG QRVA |
Detection Method: | ![]() |
Confidence: | 38.522879 |
Match: | 1egaA_ |
Description: | GTPase Era, N-terminal domain; GTPase Era C-terminal domain |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
hydrogen ion transmembrane transporter activity | 3.21952132654519 | bayes_pls_golite062009 |
monovalent inorganic cation transmembrane transporter activity | 3.06972174097431 | bayes_pls_golite062009 |
hydrogen ion transporting ATP synthase activity, rotational mechanism | 2.99135301692379 | bayes_pls_golite062009 |
inorganic cation transmembrane transporter activity | 2.81945030670779 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 2.81104198554628 | bayes_pls_golite062009 |
binding | 2.64537357529343 | bayes_pls_golite062009 |
substrate-specific transporter activity | 2.26558861202152 | bayes_pls_golite062009 |
nucleic acid binding | 2.11222585187695 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 1.93408704555564 | bayes_pls_golite062009 |
guanyl nucleotide binding | 1.89320355239381 | bayes_pls_golite062009 |
guanyl ribonucleotide binding | 1.88721318481223 | bayes_pls_golite062009 |
GTP binding | 1.87900088157196 | bayes_pls_golite062009 |
DNA binding | 1.7904783386531 | bayes_pls_golite062009 |
cation transmembrane transporter activity | 1.72121792847307 | bayes_pls_golite062009 |
transcription regulator activity | 1.68903321260301 | bayes_pls_golite062009 |
hydrolase activity | 1.29060292615008 | bayes_pls_golite062009 |
GTPase activity | 1.23010905798386 | bayes_pls_golite062009 |
purine ribonucleotide binding | 1.21658213854831 | bayes_pls_golite062009 |
ribonucleotide binding | 1.21652144153182 | bayes_pls_golite062009 |
purine nucleotide binding | 1.21571071905795 | bayes_pls_golite062009 |
nucleotide binding | 1.20347573865566 | bayes_pls_golite062009 |
catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
transcription factor activity | 0.603758349693077 | bayes_pls_golite062009 |
structural constituent of ribosome | 0.396187998943318 | bayes_pls_golite062009 |
translation regulator activity | 0.29096092258568 | bayes_pls_golite062009 |
translation factor activity, nucleic acid binding | 0.274994961137851 | bayes_pls_golite062009 |
ATP binding | 0.1860481660648 | bayes_pls_golite062009 |
protein binding | 0.170837278876362 | bayes_pls_golite062009 |
adenyl ribonucleotide binding | 0.152859582615242 | bayes_pls_golite062009 |
adenyl nucleotide binding | 0.138615225841109 | bayes_pls_golite062009 |
nucleobase, nucleoside, nucleotide kinase activity | 0.12351419478929 | bayes_pls_golite062009 |
helicase activity | 0.0775311459068899 | bayes_pls_golite062009 |
Region A: Residues: [205-313] |
1 11 21 31 41 51 | | | | | | 1 NHSWTSKEVE IINSMFLLTA KPCIYLINLS ERDYIRKKNK HLLRIKEWVD KYSPGDLIIP 60 61 FSVSLEERLS HMSPEDAEEE LKKLQTISAL PKIITTMRQK LDLISFFTC |
Detection Method: | ![]() |
Confidence: | 38.522879 |
Match: | 1egaA_ |
Description: | GTPase Era, N-terminal domain; GTPase Era C-terminal domain |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [314-394] |
1 11 21 31 41 51 | | | | | | 1 GPDEVREWTI RRGTKAPQAA GVIHNDLMNT FILAQVMKCE DVFEYKDDSA IKAAGKLMQK 60 61 GKDYVVEDGD IIYFRAGAGK N |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.825 | 0.846 | cytoplasm | c.47.1 | Thioredoxin-like |
View | Download | 0.619 | 0.000 | cytoplasm | d.68.3 | SirA-like |
View | Download | 0.560 | N/A | N/A | d.68.1 | Translation initiation factor IF3, C-terminal domain |
View | Download | 0.535 | N/A | N/A | c.15.1 | BRCT domain |
View | Download | 0.534 | N/A | N/A | b.1.1 | Immunoglobulin |
View | Download | 0.531 | N/A | N/A | c.3.1 | FAD/NAD(P)-binding domain |
View | Download | 0.503 | N/A | N/A | d.68.3 | SirA-like |
View | Download | 0.478 | N/A | N/A | d.68.1 | Translation initiation factor IF3, C-terminal domain |
View | Download | 0.467 | N/A | N/A | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
View | Download | 0.467 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
View | Download | 0.465 | N/A | N/A | d.68.6 | DNA-binding protein Sso10b (AlbA) |
View | Download | 0.440 | N/A | N/A | c.114.1 | YchN-like |
View | Download | 0.435 | N/A | N/A | c.52.1 | Restriction endonuclease-like |
View | Download | 0.433 | N/A | N/A | c.47.1 | Thioredoxin-like |
View | Download | 0.433 | N/A | N/A | d.26.1 | FKBP-like |
View | Download | 0.426 | N/A | N/A | b.1.18 | E set domains |
View | Download | 0.417 | N/A | N/A | c.47.1 | Thioredoxin-like |
View | Download | 0.414 | N/A | N/A | d.58.17 | Metal-binding domain |
View | Download | 0.405 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.397 | N/A | N/A | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
View | Download | 0.387 | N/A | N/A | d.68.6 | DNA-binding protein Sso10b (AlbA) |
View | Download | 0.363 | N/A | N/A | d.237.1 | Hypothetical protein YjiA, C-terminal domain |
View | Download | 0.362 | N/A | N/A | c.5.1 | MurCD N-terminal domain |
View | Download | 0.359 | N/A | N/A | c.44.2 | Enzyme IIB-cellobiose |
View | Download | 0.354 | N/A | N/A | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
View | Download | 0.352 | N/A | N/A | d.68.6 | DNA-binding protein Sso10b (AlbA) |
View | Download | 0.349 | N/A | N/A | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
View | Download | 0.345 | N/A | N/A | c.47.1 | Thioredoxin-like |
View | Download | 0.339 | N/A | N/A | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
View | Download | 0.337 | N/A | N/A | c.53.1 | Resolvase-like |
View | Download | 0.336 | N/A | N/A | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
View | Download | 0.334 | N/A | N/A | d.68.1 | Translation initiation factor IF3, C-terminal domain |
View | Download | 0.332 | N/A | N/A | c.114.1 | YchN-like |
View | Download | 0.321 | N/A | N/A | c.3.1 | FAD/NAD(P)-binding domain |
View | Download | 0.310 | N/A | N/A | d.58.3 | Protease propeptides/inhibitors |
View | Download | 0.306 | N/A | N/A | d.68.1 | Translation initiation factor IF3, C-terminal domain |
View | Download | 0.306 | N/A | N/A | c.3.1 | FAD/NAD(P)-binding domain |
View | Download | 0.301 | N/A | N/A | d.58.3 | Protease propeptides/inhibitors |
View | Download | 0.290 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
View | Download | 0.287 | N/A | N/A | c.114.1 | YchN-like |
View | Download | 0.282 | N/A | N/A | c.3.1 | FAD/NAD(P)-binding domain |
View | Download | 0.280 | N/A | N/A | c.84.1 | Phosphoglucomutase, first 3 domains |
View | Download | 0.278 | N/A | N/A | c.114.1 | YchN-like |
View | Download | 0.276 | N/A | N/A | d.58.10 | Acylphosphatase-like |
View | Download | 0.275 | N/A | N/A | c.114.1 | YchN-like |
View | Download | 0.271 | N/A | N/A | c.52.1 | Restriction endonuclease-like |
View | Download | 0.271 | N/A | N/A | d.68.1 | Translation initiation factor IF3, C-terminal domain |
View | Download | 0.262 | N/A | N/A | c.114.1 | YchN-like |
View | Download | 0.260 | N/A | N/A | c.102.1 | Cell-division inhibitor MinC, N-terminal domain |
View | Download | 0.257 | N/A | N/A | c.23.1 | CheY-like |
View | Download | 0.247 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
View | Download | 0.242 | N/A | N/A | c.30.1 | PreATP-grasp domain |
View | Download | 0.237 | N/A | N/A | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
View | Download | 0.236 | N/A | N/A | d.26.3 | Chitinase insertion domain |
View | Download | 0.234 | N/A | N/A | c.30.1 | PreATP-grasp domain |
View | Download | 0.229 | N/A | N/A | b.1.14 | Invasin/intimin cell-adhesion fragments |
View | Download | 0.224 | N/A | N/A | d.93.1 | SH2 domain |
View | Download | 0.220 | N/A | N/A | d.11.1 | Penicillin-binding protein 2x (pbp-2x), c-terminal domain |
View | Download | 0.220 | N/A | N/A | c.15.1 | BRCT domain |
View | Download | 0.217 | N/A | N/A | c.114.1 | YchN-like |
View | Download | 0.211 | N/A | N/A | c.52.1 | Restriction endonuclease-like |
View | Download | 0.209 | N/A | N/A | d.8.1 | Urease, gamma-subunit |
View | Download | 0.208 | N/A | N/A | d.68.5 | C-terminal domain of ProRS |
View | Download | 0.205 | N/A | N/A | c.23.5 | Flavoproteins |