| Protein: | SO0173 |
| Organism: | Shewanella oneidensis |
| Length: | 332 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SO0173.
| Description | E-value | Query Range |
Subject Range |
|
|
374.0 | [0..1] | [332..1] |
|
|
374.0 | [0..1] | [332..1] |
|
|
373.0 | [0..1] | [332..1] |
|
|
364.0 | [0..1] | [332..1] |
|
|
363.0 | [0..1] | [332..1] |
|
|
345.0 | [0..8] | [330..4] |
|
|
339.0 | [0..8] | [330..4] |
|
|
333.0 | [0..6] | [331..3] |
|
|
333.0 | [0..7] | [332..3] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MIRQSPAKQR GVALIVVLLI VAMVVIIATN ITSRNQLSMR RTLNLAQYDQ AYWYAISAEE 60
61 LAKKILKQDL DDSEGRVHKQ QYWAMSDVVF PAEYGEIAGK ISDMRSCFNL NALSVTTKDV 120
121 ENG
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.709 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.624 | N/A | N/A | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.506 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.489 | N/A | N/A | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.483 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
|
Region A: Residues: [124-332] |
1 11 21 31 41 51
| | | | | |
1 QPKLPLAAKQ YKALLVSLGM DDFTADHLTQ TLKDYIDEDT VASPYGAEDA EYEARHVPYR 60
61 AANTLMNHRS ELRAVMGYTQ DIYLKLLPYI CVIPGSDRQL LNVNTIDVEQ AALLAAMVDN 120
121 QISVGEAESV INQRPGDGFA KIDDFYESSS MGSIKWEDAM KSTFVIDSQY FLLASGAKVD 180
181 NAIFRMESVL KKGSGNKMDV LTRQFGGQK
|
| Detection Method: | |
| Confidence: | 3.39794 |
| Match: | 2oceA |
| Description: | No description for 2oceA was found. |
| Term | Confidence | Notes |
| hydrolase activity | 2.05683355697643 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 1.84247083043472 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.77126670929767 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.75283705466699 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.75052536857149 | bayes_pls_golite062009 |
| catalytic activity | 1.01731159573515 | bayes_pls_golite062009 |
| protein binding | 0.822405322523231 | bayes_pls_golite062009 |
| binding | 0.789516277654846 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity | 0.725484517901213 | bayes_pls_golite062009 |
| four-way junction helicase activity | 0.694310500879056 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 0.411733726289994 | bayes_pls_golite062009 |
| DNA helicase activity | 0.376109811653741 | bayes_pls_golite062009 |
| excinuclease ABC activity | 0.245497486623546 | bayes_pls_golite062009 |
| nuclease activity | 0.183311162116772 | bayes_pls_golite062009 |
