| Protein: | CD81_PANTR |
| Organism: | Pan troglodytes |
| Length: | 236 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CD81_PANTR.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-53 | [1..236] | [1..236] |
|
|
9.0E-53 | [1..236] | [1..236] |
|
|
1.0E-52 | [1..236] | [1..236] |
|
|
2.0E-52 | [1..236] | [1..236] |
|
|
1.0E-51 | [1..236] | [1..236] |
|
|
2.0E-51 | [1..236] | [1..236] |
|
|
2.0E-51 | [1..236] | [1..236] |
|
|
6.0E-51 | [1..236] | [1..236] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MGVEGCTKCI KYLLFVFNFV FWLAGGVILG VALWLRHDPQ TTNLLYLELG DKPAPNTFYV 60
61 GIYILIAVGA VMMFVGFLGC YGAIQESQCL LGTFFTCLVI LFACEVAAGI
|
| Detection Method: |  |
| Confidence: | 1.1 |
| Match: | 1oedC |
| Description: | Acetylcholine receptor protein, delta chain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nicotinic acetylcholine-activated cation-selective channel activity | 8.09774750177444 | bayes_pls_golite062009 |
| extracellular ligand-gated ion channel activity | 6.8138989067086 | bayes_pls_golite062009 |
| excitatory extracellular ligand-gated ion channel activity | 6.8138989067086 | bayes_pls_golite062009 |
| acetylcholine binding | 6.04235159077861 | bayes_pls_golite062009 |
| gated channel activity | 5.66609833149359 | bayes_pls_golite062009 |
| ligand-gated channel activity | 5.65359564397775 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 5.65359564397775 | bayes_pls_golite062009 |
| ion channel activity | 5.59877286813906 | bayes_pls_golite062009 |
| cation channel activity | 5.49725615782424 | bayes_pls_golite062009 |
| acetylcholine receptor activity | 5.40168515414817 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 4.88852337948775 | bayes_pls_golite062009 |
| channel activity | 4.88852337948775 | bayes_pls_golite062009 |
| substrate-specific channel activity | 4.75987274214331 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 4.43671572548228 | bayes_pls_golite062009 |
| transporter activity | 4.33216679738402 | bayes_pls_golite062009 |
| transmembrane transporter activity | 4.2745563261123 | bayes_pls_golite062009 |
| amine binding | 4.25140819530684 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 4.19026880603966 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 4.14475572252231 | bayes_pls_golite062009 |
| transmembrane receptor activity | 4.13892843658445 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 4.11908493779954 | bayes_pls_golite062009 |
| receptor activity | 3.9625821847327 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 3.94631845574808 | bayes_pls_golite062009 |
| molecular transducer activity | 3.87903570844696 | bayes_pls_golite062009 |
| signal transducer activity | 3.87903570844696 | bayes_pls_golite062009 |
| chloride channel regulator activity | 3.80555448212147 | bayes_pls_golite062009 |
| neurotransmitter binding | 3.68173030115209 | bayes_pls_golite062009 |
| neurotransmitter receptor activity | 3.59464831713762 | bayes_pls_golite062009 |
| toxin binding | 2.56943469551261 | bayes_pls_golite062009 |
| binding | 2.40028520341187 | bayes_pls_golite062009 |
| protein binding | 1.46482989994288 | bayes_pls_golite062009 |
| drug binding | 0.721991254175078 | bayes_pls_golite062009 |
| serotonin binding | 0.707250780695203 | bayes_pls_golite062009 |
| serotonin-activated cation-selective channel activity | 0.684758689525935 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.35204430646141 | bayes_pls_golite062009 |
| kinase binding | 0.292964438799031 | bayes_pls_golite062009 |
| 0.269193639162997 | bayes_pls_golite062009 | |
| protein kinase binding | 0.267267173186573 | bayes_pls_golite062009 |
| channel regulator activity | 0.252055844136184 | bayes_pls_golite062009 |
| adenylate cyclase binding | 0.109562749490086 | bayes_pls_golite062009 |
|
Region A: Residues: [111-236] |
1 11 21 31 41 51
| | | | | |
1 WGFVNKDQIA KDVKQFYDQA LQQAVVDDDA NNAKAVVKTF HETLDCCGSS TLTALTTSVL 60
61 KNNLCPSGSN IISNLFKEDC HQKIDDLFSG KLYLIGIAAI VVAVIMIFEM ILSMVLCCGI 120
121 RNSSVY
|
| Detection Method: | |
| Confidence: | 11.69897 |
| Match: | 1g8qA |
| Description: | CD81 extracellular domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.71804056581958 | bayes_pls_golite062009 |
| binding | 1.62531598262239 | bayes_pls_golite062009 |
