| Protein: | pug-PB, pug-PD |
| Organism: | Drosophila melanogaster |
| Length: | 968 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pug-PB, pug-PD.
| Description | E-value | Query Range |
Subject Range |
|
|
1434.0 | [0..36] | [968..1] |
|
Region A: Residues: [1-342] |
1 11 21 31 41 51
| | | | | |
1 MSAQYQRFLK VLEKWPAEKS KVGSGEWTAE PAIKMSGAKI ISGTAVAKSI REELRNEVTA 60
61 MSKQLADFVP GLRIVQVGGR EDSNVYIRMK IKAATEIGID AAHVQLPRSI TEVELLDKIN 120
121 DLNEDPRVHG IIVQMPLDCD TPIDSHRITD AVSPEKDVDG LHTVNEGRLA IGDLGGFLPC 180
181 TPWGCLELIR RSGVEIAGAR AVVLGRSKIV GTPAAELLKW ANATVTVCHS KTRNLEEITR 240
241 SADILVVGIG VAEMVKGSWI KPGAVVIDCG INVKPDASKA SGSKLVGDVD YAEALQVAGH 300
301 LTPVPGGVGP MTVAMLMKNT VRSAARFLER LAKSQWALQT LP
|
| Detection Method: |  |
| Confidence: | 108.0 |
| Match: | 1diaA |
| Description: | Methylenetetrahydrofolate dehydrogenase/cyclohydrolase; Tetrahydrofolate dehydrogenase/cyclohydrolase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [343-968] |
1 11 21 31 41 51
| | | | | |
1 LKPQRPVPSD IVIARAQKPK DIAVLAKEIG LEAREVSLYG NKKAKISLSV LERLKDKEVG 60
61 HYVVVAGMTP TPLGEGKTTT LMGLVQALGA HKLRNTMAAL RQPSQGPTFG IKGGAAGGGY 120
121 AQVIPMEEFN LHLTGDIHAV SAANNLLAAQ LDTRIFHENT QKDKALYDRL VPAIKGQRKF 180
181 SPIQLRRLQK LGITKTDPDT LTADEYGPFA RLDIDPDTIM WERVVDINDR YLRTITVGQS 240
241 PTEKGISRET RFSISVASEI MAVLALSRSL EDMKQRLADM VVAFDKRGKP VTADDLGVTG 300
301 ALAVLLKDAL EPNLMQSLEG TPVLVHAGPF ANIAHGCNSI IADEVGLKLV GKNGFVCTEA 360
361 GFGSDIGMEK FCNIKCRTSG RKPNAMVLVA TVRAIKMHGG GAPVTPGAPL NKQYTEENLE 420
421 LVQKGLPNLL QHIENGKAFG MPVVVSLNAH SADTPAEHEL VKKAALEAGA FAAVVSTHWA 480
481 DGGAGAVQLA DAVIKACEQG NQFRLLYDLE LPLVDKMNKI ATTMYGAGKV VLSPAAEEKV 540
541 KRLTDAGFGN LPICMSKVSG SFTGDAKIKG APKGFTLDVE DVYVSAGAGF VVAMCGEVTK 600
601 MPGLPTRPAI YDIDLNTETG EIEGLF
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1fp7A |
| Description: | Formyltetrahydrofolate synthetase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| nucleic acid binding | 2.51683451033161 | bayes_pls_golite062009 |
| translation initiation factor activity | 2.41232228963167 | bayes_pls_golite062009 |
| DNA binding | 2.12258000781149 | bayes_pls_golite062009 |
| transcription regulator activity | 2.09345198747025 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 1.55478124277326 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 1.55478124277326 | bayes_pls_golite062009 |
| hydrolase activity | 1.29060292615008 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.1110976601505 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.11103644113672 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.1086792521709 | bayes_pls_golite062009 |
| nucleotide binding | 1.1060655022247 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| transcription factor activity | 0.887108427603557 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 0.854899277460172 | bayes_pls_golite062009 |
| RNA helicase activity | 0.81256037545135 | bayes_pls_golite062009 |
| ATP binding | 0.80197288940364 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.770085840885632 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.751575230566049 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.74918137191219 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.738234102557832 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 0.694120974355463 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 0.69117331267457 | bayes_pls_golite062009 |
| N-acyltransferase activity | 0.581315571752634 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 0.487240078246257 | bayes_pls_golite062009 |
| kinase activity | 0.431162005044036 | bayes_pls_golite062009 |
| ligase activity | 0.417681194526243 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.347619818489809 | bayes_pls_golite062009 |
| translation regulator activity | 0.29096092258568 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.274994961137851 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.250756824614616 | bayes_pls_golite062009 |
| acetyltransferase activity | 0.190660928077915 | bayes_pls_golite062009 |
| protein binding | 0.170837278876362 | bayes_pls_golite062009 |
| nucleobase, nucleoside, nucleotide kinase activity | 0.12351419478929 | bayes_pls_golite062009 |
| helicase activity | 0.0775311459068899 | bayes_pls_golite062009 |
| structural molecule activity | 0.0558641287316701 | bayes_pls_golite062009 |
| RNA binding | 0.0261282189186349 | bayes_pls_golite062009 |
