| Protein: | CE36601 |
| Organism: | Caenorhabditis elegans |
| Length: | 532 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36601.
| Description | E-value | Query Range |
Subject Range |
|
|
566.0 | [0..2] | [531..3] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MSDESEALLR VDHVKYRKAG DGKSPIGRLA LFTDFIEWRD NASPEVFTCK FIRINGQRVS 60
61 PPHKSKVQLQ LILKNEDQAT FVFLNPSASK EDLVKERDAV KEALQSALVK HRHRVNELAK 120
121 S
|
| Detection Method: |  |
| Confidence: | 32.69897 |
| Match: | 1pfjA |
| Description: | Solution structure of the N-terminal PH/PTB domain of the TFIIH P62 subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 6.19860786133833 | bayes_pls_golite062009 |
| binding | 3.29080729281876 | bayes_pls_golite062009 |
| protein binding | 3.17213698546013 | bayes_pls_golite062009 |
| transcription regulator activity | 2.10584700564436 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 2.05456820914801 | bayes_pls_golite062009 |
| nucleic acid binding | 1.85794418941003 | bayes_pls_golite062009 |
| DNA binding | 1.77960272183811 | bayes_pls_golite062009 |
| transcription elongation regulator activity | 1.38051627844132 | bayes_pls_golite062009 |
| enzyme binding | 0.977337620102034 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.704949129344961 | bayes_pls_golite062009 |
| protein kinase activity | 0.565124275151513 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.361321073558889 | bayes_pls_golite062009 |
| hydrolase activity | 0.354215977182915 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.268141992393579 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.242734483980252 | bayes_pls_golite062009 |
| protein domain specific binding | 0.236765394237244 | bayes_pls_golite062009 |
| kinase activity | 0.206532566781865 | bayes_pls_golite062009 |
| kinase binding | 0.144753921529348 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.0735802149531289 | bayes_pls_golite062009 |
| actin binding | 0.0485598963526399 | bayes_pls_golite062009 |
|
Region A: Residues: [122-171] |
1 11 21 31 41 51
| | | | | |
1 VESQSKQVEL QAKQKILQED RNLEKLYQNL VATKLITPDD FWSDYYQKEG
|
| Detection Method: | |
| Confidence: | 2.08 |
| Match: | 2diiA |
| Description: | No description for 2diiA was found. |
|
Region A: Residues: [172-302] |
1 11 21 31 41 51
| | | | | |
1 VSEDKIGING AFLANIVQQE GTNGVRLNLN PEIIQAIYST YPAVQKKNLE LVPHEMSEEN 60
61 FWKKFFQSHY FHREREVLPN PKDPFAECVR DDEEEMTKMT AEKIQRKRFD LEHIDDNGLR 120
121 DFIHKSESQQ K
|
| Detection Method: | |
| Confidence: | 17.39794 |
| Match: | PF03909.8 |
| Description: | No description for PF03909.8 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.340 | 0.922 | regulation of cyclin-dependent protein kinase activity | a.74.1 | Cyclin-like |
| View | Download | 0.621 | 0.031 | regulation of cyclin-dependent protein kinase activity | c.47.1 | Thioredoxin-like |
| View | Download | 0.247 | 0.003 | DNA repair | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.299 | 0.001 | regulation of cyclin-dependent protein kinase activity | a.160.1 | Poly(A) polymerase, middle domain |
| View | Download | 0.254 | 0.000 | regulation of cyclin-dependent protein kinase activity | a.141.1 | Frizzled cystein-rich domain |
|
Region A: Residues: [303-443] |
1 11 21 31 41 51
| | | | | |
1 SAKTTLIKRC NYLSEKILAT SWRSGEAAPT TSAAANQKKG FGVLDRLVAE TETRLESEDL 60
61 ATKEAEDEVQ IVRISSSAKA SQAKYSKPDM TRYKALVTDY FQNSSVEDIL HRNEMLLDQQ 120
121 EMETWEMEEA METDNNEVPP P
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [444-532] |
1 11 21 31 41 51
| | | | | |
1 ENWCQSAGDL AKVRDVHSAV REICRQFWKS FPPIDKASEE KLNRMAGTLS KYRDDIRNSD 60
61 ISKENLTHCI QMIDLAVDKF EAYEMKKMK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
